Gene : Araha.11756s0178 A. halleri v1.1
Defline:  (1 of 3) PTHR11544 - COLD SHOCK DOMAIN CONTAINING PROTEINS Genomic Order:  178
Name:  ? Araha.11756s0178 Secondary Identifier:  ? PAC:28856379
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0178 0.5kb upstream 0.5kb upstream 710 true Scaffold11756: 266083-266792 Arabidopsis halleri
Araha.11756s0178 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 266293-266792 Arabidopsis halleri
Araha.11756s0178 0.5kb downstream 0.5kb downstream 710 true Scaffold11756: 265583-266292 Arabidopsis halleri
Araha.11756s0178 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 265583-266082 Arabidopsis halleri
Araha.11756s0178 1.0kb upstream 1.0kb upstream 1210 true Scaffold11756: 266083-267292 Arabidopsis halleri
Araha.11756s0178 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 266293-267292 Arabidopsis halleri
Araha.11756s0178 1.0kb downstream 1.0kb downstream 1210 true Scaffold11756: 265083-266292 Arabidopsis halleri
Araha.11756s0178 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 265083-266082 Arabidopsis halleri
Araha.11756s0178 2.0kb upstream 2.0kb upstream 2210 true Scaffold11756: 266083-268292 Arabidopsis halleri
Araha.11756s0178 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 266293-268292 Arabidopsis halleri
Araha.11756s0178 2.0kb downstream 2.0kb downstream 2210 true Scaffold11756: 264083-266292 Arabidopsis halleri
Araha.11756s0178 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 264083-266082 Arabidopsis halleri
Araha.11756s0178 5.0kb upstream 5.0kb upstream 5210 true Scaffold11756: 266083-271292 Arabidopsis halleri
Araha.11756s0178 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 266293-271292 Arabidopsis halleri
Araha.11756s0178 5.0kb downstream 5.0kb downstream 5210 true Scaffold11756: 261083-266292 Arabidopsis halleri
Araha.11756s0178 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 261083-266082 Arabidopsis halleri
Araha.11756s0178 10.0kb upstream 10.0kb upstream 10210 true Scaffold11756: 266083-276292 Arabidopsis halleri
Araha.11756s0178 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 266293-276292 Arabidopsis halleri
Araha.11756s0178 10.0kb downstream 10.0kb downstream 10210 true Scaffold11756: 256083-266292 Arabidopsis halleri
Araha.11756s0178 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 256083-266082 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121919309 5273 Angiosperm View MSA
122320604 5261 Brassicaceae Singleton cluster - no MSA
123762200 5264 Brassicales-Malvales Singleton cluster - no MSA
124260835 5266 SBM Singleton cluster - no MSA
124117455 5268 Malvidae Singleton cluster - no MSA
123846847 5270 Rosid Singleton cluster - no MSA
123433128 5271 Pentapetalae Singleton cluster - no MSA
122468748 5272 Eudicot Singleton cluster - no MSA
121189802 5274 Embryophyte View MSA
123228615 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain