Gene : Araha.11756s0159 A. halleri v1.1
Defline:  (1 of 1) PTHR11624:SF20 - 1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 1-RELATED Genomic Order:  159
Name:  ? Araha.11756s0159 Secondary Identifier:  ? PAC:28856256
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7560 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0159 0.5kb upstream 0.5kb upstream 2330 true Scaffold11756: 235443-237772 Arabidopsis halleri
Araha.11756s0159 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 237273-237772 Arabidopsis halleri
Araha.11756s0159 0.5kb downstream 0.5kb downstream 2330 true Scaffold11756: 234943-237272 Arabidopsis halleri
Araha.11756s0159 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 234943-235442 Arabidopsis halleri
Araha.11756s0159 1.0kb upstream 1.0kb upstream 2830 true Scaffold11756: 235443-238272 Arabidopsis halleri
Araha.11756s0159 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 237273-238272 Arabidopsis halleri
Araha.11756s0159 1.0kb downstream 1.0kb downstream 2830 true Scaffold11756: 234443-237272 Arabidopsis halleri
Araha.11756s0159 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 234443-235442 Arabidopsis halleri
Araha.11756s0159 2.0kb upstream 2.0kb upstream 3830 true Scaffold11756: 235443-239272 Arabidopsis halleri
Araha.11756s0159 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 237273-239272 Arabidopsis halleri
Araha.11756s0159 2.0kb downstream 2.0kb downstream 3830 true Scaffold11756: 233443-237272 Arabidopsis halleri
Araha.11756s0159 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 233443-235442 Arabidopsis halleri
Araha.11756s0159 5.0kb upstream 5.0kb upstream 6830 true Scaffold11756: 235443-242272 Arabidopsis halleri
Araha.11756s0159 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 237273-242272 Arabidopsis halleri
Araha.11756s0159 5.0kb downstream 5.0kb downstream 6830 true Scaffold11756: 230443-237272 Arabidopsis halleri
Araha.11756s0159 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 230443-235442 Arabidopsis halleri
Araha.11756s0159 10.0kb upstream 10.0kb upstream 11830 true Scaffold11756: 235443-247272 Arabidopsis halleri
Araha.11756s0159 10.0kb upstream 10.0kb upstream 10000 false Scaffold11756: 237273-247272 Arabidopsis halleri
Araha.11756s0159 10.0kb downstream 10.0kb downstream 11830 true Scaffold11756: 225443-237272 Arabidopsis halleri
Araha.11756s0159 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 225443-235442 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369320 5261 Brassicaceae View MSA
123830613 5264 Brassicales-Malvales View MSA
124343663 5266 SBM View MSA
124239163 5268 Malvidae View MSA
124069132 5270 Rosid View MSA
123739716 5271 Pentapetalae View MSA
122785691 5272 Eudicot View MSA
122043887 5273 Angiosperm View MSA
121350299 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain