Gene : Araha.5942s0006 A. halleri v1.1
Defline:  (1 of 1) 1.1.5.3 - Glycerol-3-phosphate dehydrogenase / sn-glycerol-3-phosphate dehydrogenase Genomic Order:  6
Name:  ? Araha.5942s0006 Secondary Identifier:  ? PAC:28846796
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-4261 Arabidopsis halleri pathologic  
Ahalleri PWY-6118 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5942s0006 0.5kb upstream 0.5kb upstream 3026 true Scaffold5942: 28475-31500 Arabidopsis halleri
Araha.5942s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold5942: 31001-31500 Arabidopsis halleri
Araha.5942s0006 0.5kb downstream 0.5kb downstream 3026 true Scaffold5942: 27975-31000 Arabidopsis halleri
Araha.5942s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold5942: 27975-28474 Arabidopsis halleri
Araha.5942s0006 1.0kb upstream 1.0kb upstream 3526 true Scaffold5942: 28475-32000 Arabidopsis halleri
Araha.5942s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold5942: 31001-32000 Arabidopsis halleri
Araha.5942s0006 1.0kb downstream 1.0kb downstream 3526 true Scaffold5942: 27475-31000 Arabidopsis halleri
Araha.5942s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold5942: 27475-28474 Arabidopsis halleri
Araha.5942s0006 2.0kb upstream 2.0kb upstream 4526 true Scaffold5942: 28475-33000 Arabidopsis halleri
Araha.5942s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold5942: 31001-33000 Arabidopsis halleri
Araha.5942s0006 2.0kb downstream 2.0kb downstream 4526 true Scaffold5942: 26475-31000 Arabidopsis halleri
Araha.5942s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold5942: 26475-28474 Arabidopsis halleri
Araha.5942s0006 5.0kb upstream 5.0kb upstream 7526 true Scaffold5942: 28475-36000 Arabidopsis halleri
Araha.5942s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold5942: 31001-36000 Arabidopsis halleri
Araha.5942s0006 5.0kb downstream 5.0kb downstream 7526 true Scaffold5942: 23475-31000 Arabidopsis halleri
Araha.5942s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold5942: 23475-28474 Arabidopsis halleri
Araha.5942s0006 10.0kb upstream 10.0kb upstream 12526 true Scaffold5942: 28475-41000 Arabidopsis halleri
Araha.5942s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold5942: 31001-41000 Arabidopsis halleri
Araha.5942s0006 10.0kb downstream 10.0kb downstream 12526 true Scaffold5942: 18475-31000 Arabidopsis halleri
Araha.5942s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold5942: 18475-28474 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373784 5261 Brassicaceae View MSA
123832486 5264 Brassicales-Malvales View MSA
124343692 5266 SBM View MSA
124239485 5268 Malvidae View MSA
124061929 5270 Rosid View MSA
123753233 5271 Pentapetalae View MSA
122790544 5272 Eudicot View MSA
122048322 5273 Angiosperm View MSA
121344080 5274 Embryophyte View MSA
123427532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain