Gene : Araha.12445s0004 A. halleri v1.1

Defline:  (1 of 2) KOG3219 - Transcription initiation factor TFIID, subunit TAF11 Genomic Order:  4
Name:  ? Araha.12445s0004 Secondary Identifier:  ? PAC:28837909

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12445s0004 0.5kb upstream 0.5kb upstream 956 true Scaffold12445: 11242-12197 Arabidopsis halleri
Araha.12445s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold12445: 11242-11741 Arabidopsis halleri
Araha.12445s0004 0.5kb downstream 0.5kb downstream 956 true Scaffold12445: 11742-12697 Arabidopsis halleri
Araha.12445s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold12445: 12198-12697 Arabidopsis halleri
Araha.12445s0004 1.0kb upstream 1.0kb upstream 1456 true Scaffold12445: 10742-12197 Arabidopsis halleri
Araha.12445s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold12445: 10742-11741 Arabidopsis halleri
Araha.12445s0004 1.0kb downstream 1.0kb downstream 1456 true Scaffold12445: 11742-13197 Arabidopsis halleri
Araha.12445s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold12445: 12198-13197 Arabidopsis halleri
Araha.12445s0004 2.0kb upstream 2.0kb upstream 2456 true Scaffold12445: 9742-12197 Arabidopsis halleri
Araha.12445s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold12445: 9742-11741 Arabidopsis halleri
Araha.12445s0004 2.0kb downstream 2.0kb downstream 2456 true Scaffold12445: 11742-14197 Arabidopsis halleri
Araha.12445s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold12445: 12198-14197 Arabidopsis halleri
Araha.12445s0004 5.0kb upstream 5.0kb upstream 5456 true Scaffold12445: 6742-12197 Arabidopsis halleri
Araha.12445s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold12445: 6742-11741 Arabidopsis halleri
Araha.12445s0004 5.0kb downstream 5.0kb downstream 5456 true Scaffold12445: 11742-17197 Arabidopsis halleri
Araha.12445s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold12445: 12198-17197 Arabidopsis halleri
Araha.12445s0004 10.0kb upstream 10.0kb upstream 10456 true Scaffold12445: 1742-12197 Arabidopsis halleri
Araha.12445s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold12445: 1742-11741 Arabidopsis halleri
Araha.12445s0004 10.0kb downstream 10.0kb downstream 10456 true Scaffold12445: 11742-22197 Arabidopsis halleri
Araha.12445s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold12445: 12198-22197 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665429 5273 Angiosperm View MSA
122327679 5261 Brassicaceae View MSA
123769087 5264 Brassicales-Malvales View MSA
124267661 5266 SBM View MSA
124123956 5268 Malvidae View MSA
124050414 5270 Rosid View MSA
123619794 5271 Pentapetalae View MSA
122654230 5272 Eudicot View MSA
120937396 5274 Embryophyte View MSA
123426477 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain