Gene : Araha.6120s0007 A. halleri v1.1

Defline:  (1 of 5) PF11961 - Domain of unknown function (DUF3475) (DUF3475) Genomic Order:  7
Name:  ? Araha.6120s0007 Secondary Identifier:  ? PAC:28858063

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.6120s0007 0.5kb upstream 0.5kb upstream 3366 true Scaffold6120: 32441-35806 Arabidopsis halleri
Araha.6120s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold6120: 35307-35806 Arabidopsis halleri
Araha.6120s0007 0.5kb downstream 0.5kb downstream 3366 true Scaffold6120: 31941-35306 Arabidopsis halleri
Araha.6120s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold6120: 31941-32440 Arabidopsis halleri
Araha.6120s0007 1.0kb upstream 1.0kb upstream 3866 true Scaffold6120: 32441-36306 Arabidopsis halleri
Araha.6120s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold6120: 35307-36306 Arabidopsis halleri
Araha.6120s0007 1.0kb downstream 1.0kb downstream 3866 true Scaffold6120: 31441-35306 Arabidopsis halleri
Araha.6120s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold6120: 31441-32440 Arabidopsis halleri
Araha.6120s0007 2.0kb upstream 2.0kb upstream 4866 true Scaffold6120: 32441-37306 Arabidopsis halleri
Araha.6120s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold6120: 35307-37306 Arabidopsis halleri
Araha.6120s0007 2.0kb downstream 2.0kb downstream 4866 true Scaffold6120: 30441-35306 Arabidopsis halleri
Araha.6120s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold6120: 30441-32440 Arabidopsis halleri
Araha.6120s0007 5.0kb upstream 5.0kb upstream 7866 true Scaffold6120: 32441-40306 Arabidopsis halleri
Araha.6120s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold6120: 35307-40306 Arabidopsis halleri
Araha.6120s0007 5.0kb downstream 5.0kb downstream 7866 true Scaffold6120: 27441-35306 Arabidopsis halleri
Araha.6120s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold6120: 27441-32440 Arabidopsis halleri
Araha.6120s0007 10.0kb upstream 10.0kb upstream 12866 true Scaffold6120: 32441-45306 Arabidopsis halleri
Araha.6120s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold6120: 35307-45306 Arabidopsis halleri
Araha.6120s0007 10.0kb downstream 10.0kb downstream 12866 true Scaffold6120: 22441-35306 Arabidopsis halleri
Araha.6120s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold6120: 22441-32440 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368249 5261 Brassicaceae View MSA
123831814 5264 Brassicales-Malvales View MSA
124350094 5266 SBM View MSA
124237921 5268 Malvidae View MSA
124069085 5270 Rosid View MSA
123744675 5271 Pentapetalae View MSA
122797750 5272 Eudicot View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain