Gene : Araha.12798s0005 A. halleri v1.1
Defline:  (1 of 1) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  5
Name:  ? Araha.12798s0005 Secondary Identifier:  ? PAC:28849884
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12798s0005 0.5kb upstream 0.5kb upstream 6081 true Scaffold12798: 19550-25630 Arabidopsis halleri
Araha.12798s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold12798: 19550-20049 Arabidopsis halleri
Araha.12798s0005 0.5kb downstream 0.5kb downstream 6081 true Scaffold12798: 20050-26130 Arabidopsis halleri
Araha.12798s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold12798: 25631-26130 Arabidopsis halleri
Araha.12798s0005 1.0kb upstream 1.0kb upstream 6581 true Scaffold12798: 19050-25630 Arabidopsis halleri
Araha.12798s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold12798: 19050-20049 Arabidopsis halleri
Araha.12798s0005 1.0kb downstream 1.0kb downstream 6581 true Scaffold12798: 20050-26630 Arabidopsis halleri
Araha.12798s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold12798: 25631-26630 Arabidopsis halleri
Araha.12798s0005 2.0kb upstream 2.0kb upstream 7581 true Scaffold12798: 18050-25630 Arabidopsis halleri
Araha.12798s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold12798: 18050-20049 Arabidopsis halleri
Araha.12798s0005 2.0kb downstream 2.0kb downstream 7581 true Scaffold12798: 20050-27630 Arabidopsis halleri
Araha.12798s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold12798: 25631-27630 Arabidopsis halleri
Araha.12798s0005 5.0kb upstream 5.0kb upstream 10581 true Scaffold12798: 15050-25630 Arabidopsis halleri
Araha.12798s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold12798: 15050-20049 Arabidopsis halleri
Araha.12798s0005 5.0kb downstream 5.0kb downstream 10581 true Scaffold12798: 20050-30630 Arabidopsis halleri
Araha.12798s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold12798: 25631-30630 Arabidopsis halleri
Araha.12798s0005 10.0kb upstream 10.0kb upstream 15581 true Scaffold12798: 10050-25630 Arabidopsis halleri
Araha.12798s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold12798: 10050-20049 Arabidopsis halleri
Araha.12798s0005 10.0kb downstream 10.0kb downstream 15581 true Scaffold12798: 20050-35630 Arabidopsis halleri
Araha.12798s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold12798: 25631-35630 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366402 5261 Brassicaceae View MSA
123830825 5264 Brassicales-Malvales View MSA
124341385 5266 SBM View MSA
124238716 5268 Malvidae View MSA
124068574 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain