Gene : Araha.12605s0003 A. halleri v1.1
Defline:  (1 of 2) PTHR12161:SF14 - REGULATOR OF VPS4 Genomic Order:  3
Name:  ? Araha.12605s0003 Secondary Identifier:  ? PAC:28853469
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12605s0003 0.5kb upstream 0.5kb upstream 3927 true Scaffold12605: 7768-11694 Arabidopsis halleri
Araha.12605s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold12605: 11195-11694 Arabidopsis halleri
Araha.12605s0003 0.5kb downstream 0.5kb downstream 3927 true Scaffold12605: 7268-11194 Arabidopsis halleri
Araha.12605s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold12605: 7268-7767 Arabidopsis halleri
Araha.12605s0003 1.0kb upstream 1.0kb upstream 4427 true Scaffold12605: 7768-12194 Arabidopsis halleri
Araha.12605s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold12605: 11195-12194 Arabidopsis halleri
Araha.12605s0003 1.0kb downstream 1.0kb downstream 4427 true Scaffold12605: 6768-11194 Arabidopsis halleri
Araha.12605s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold12605: 6768-7767 Arabidopsis halleri
Araha.12605s0003 2.0kb upstream 2.0kb upstream 5427 true Scaffold12605: 7768-13194 Arabidopsis halleri
Araha.12605s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold12605: 11195-13194 Arabidopsis halleri
Araha.12605s0003 2.0kb downstream 2.0kb downstream 5427 true Scaffold12605: 5768-11194 Arabidopsis halleri
Araha.12605s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold12605: 5768-7767 Arabidopsis halleri
Araha.12605s0003 5.0kb upstream 5.0kb upstream 8427 true Scaffold12605: 7768-16194 Arabidopsis halleri
Araha.12605s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold12605: 11195-16194 Arabidopsis halleri
Araha.12605s0003 5.0kb downstream 5.0kb downstream 8427 true Scaffold12605: 2768-11194 Arabidopsis halleri
Araha.12605s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold12605: 2768-7767 Arabidopsis halleri
Araha.12605s0003 10.0kb upstream 10.0kb upstream 13427 true Scaffold12605: 7768-21194 Arabidopsis halleri
Araha.12605s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold12605: 11195-21194 Arabidopsis halleri
Araha.12605s0003 10.0kb downstream 10.0kb downstream 11194 true Scaffold12605: 1-11194 Arabidopsis halleri
Araha.12605s0003 10.0kb downstream 10.0kb downstream 7767 false Scaffold12605: 1-7767 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364977 5261 Brassicaceae View MSA
123835465 5264 Brassicales-Malvales View MSA
124351115 5266 SBM View MSA
124249863 5268 Malvidae View MSA
124066649 5270 Rosid View MSA
123746994 5271 Pentapetalae View MSA
122787378 5272 Eudicot View MSA
122041860 5273 Angiosperm View MSA
121351542 5274 Embryophyte View MSA
123382216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain