Gene : Araha.12680s0003 A. halleri v1.1
Defline:  (1 of 3) PTHR22603:SF39 - CHOLINE KINASE 1-RELATED Genomic Order:  3
Name:  ? Araha.12680s0003 Secondary Identifier:  ? PAC:28843809
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3385 Arabidopsis halleri pathologic  
Ahalleri PWY3O-450 Arabidopsis halleri pathologic  
Ahalleri PWY4FS-6 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12680s0003 0.5kb upstream 0.5kb upstream 3471 true Scaffold12680: 11190-14660 Arabidopsis halleri
Araha.12680s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold12680: 14161-14660 Arabidopsis halleri
Araha.12680s0003 0.5kb downstream 0.5kb downstream 3471 true Scaffold12680: 10690-14160 Arabidopsis halleri
Araha.12680s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold12680: 10690-11189 Arabidopsis halleri
Araha.12680s0003 1.0kb upstream 1.0kb upstream 3971 true Scaffold12680: 11190-15160 Arabidopsis halleri
Araha.12680s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold12680: 14161-15160 Arabidopsis halleri
Araha.12680s0003 1.0kb downstream 1.0kb downstream 3971 true Scaffold12680: 10190-14160 Arabidopsis halleri
Araha.12680s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold12680: 10190-11189 Arabidopsis halleri
Araha.12680s0003 2.0kb upstream 2.0kb upstream 4971 true Scaffold12680: 11190-16160 Arabidopsis halleri
Araha.12680s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold12680: 14161-16160 Arabidopsis halleri
Araha.12680s0003 2.0kb downstream 2.0kb downstream 4971 true Scaffold12680: 9190-14160 Arabidopsis halleri
Araha.12680s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold12680: 9190-11189 Arabidopsis halleri
Araha.12680s0003 5.0kb upstream 5.0kb upstream 5231 true Scaffold12680: 11190-16420 Arabidopsis halleri
Araha.12680s0003 5.0kb upstream 5.0kb upstream 2260 false Scaffold12680: 14161-16420 Arabidopsis halleri
Araha.12680s0003 5.0kb downstream 5.0kb downstream 7971 true Scaffold12680: 6190-14160 Arabidopsis halleri
Araha.12680s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold12680: 6190-11189 Arabidopsis halleri
Araha.12680s0003 10.0kb upstream 10.0kb upstream 5231 true Scaffold12680: 11190-16420 Arabidopsis halleri
Araha.12680s0003 10.0kb upstream 10.0kb upstream 2260 false Scaffold12680: 14161-16420 Arabidopsis halleri
Araha.12680s0003 10.0kb downstream 10.0kb downstream 12971 true Scaffold12680: 1190-14160 Arabidopsis halleri
Araha.12680s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold12680: 1190-11189 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372650 5261 Brassicaceae View MSA
123840519 5264 Brassicales-Malvales View MSA
124340711 5266 SBM View MSA
124247486 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain