Gene : Araha.12680s0001 A. halleri v1.1
Defline:  (1 of 3) PTHR11200:SF128 - TYPE I INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1 Genomic Order:  1
Name:  ? Araha.12680s0001 Secondary Identifier:  ? PAC:28843811
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6358 Arabidopsis halleri pathologic  
Ahalleri PWY-6363 Arabidopsis halleri pathologic  
Ahalleri PWY-6364 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12680s0001 0.5kb upstream 0.5kb upstream 3547 true Scaffold12680: 3019-6565 Arabidopsis halleri
Araha.12680s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold12680: 6066-6565 Arabidopsis halleri
Araha.12680s0001 0.5kb downstream 0.5kb downstream 3547 true Scaffold12680: 2519-6065 Arabidopsis halleri
Araha.12680s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12680: 2519-3018 Arabidopsis halleri
Araha.12680s0001 1.0kb upstream 1.0kb upstream 4047 true Scaffold12680: 3019-7065 Arabidopsis halleri
Araha.12680s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold12680: 6066-7065 Arabidopsis halleri
Araha.12680s0001 1.0kb downstream 1.0kb downstream 4047 true Scaffold12680: 2019-6065 Arabidopsis halleri
Araha.12680s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold12680: 2019-3018 Arabidopsis halleri
Araha.12680s0001 2.0kb upstream 2.0kb upstream 5047 true Scaffold12680: 3019-8065 Arabidopsis halleri
Araha.12680s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold12680: 6066-8065 Arabidopsis halleri
Araha.12680s0001 2.0kb downstream 2.0kb downstream 5047 true Scaffold12680: 1019-6065 Arabidopsis halleri
Araha.12680s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold12680: 1019-3018 Arabidopsis halleri
Araha.12680s0001 5.0kb upstream 5.0kb upstream 8047 true Scaffold12680: 3019-11065 Arabidopsis halleri
Araha.12680s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold12680: 6066-11065 Arabidopsis halleri
Araha.12680s0001 5.0kb downstream 5.0kb downstream 6065 true Scaffold12680: 1-6065 Arabidopsis halleri
Araha.12680s0001 5.0kb downstream 5.0kb downstream 3018 false Scaffold12680: 1-3018 Arabidopsis halleri
Araha.12680s0001 10.0kb upstream 10.0kb upstream 13047 true Scaffold12680: 3019-16065 Arabidopsis halleri
Araha.12680s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold12680: 6066-16065 Arabidopsis halleri
Araha.12680s0001 10.0kb downstream 10.0kb downstream 6065 true Scaffold12680: 1-6065 Arabidopsis halleri
Araha.12680s0001 10.0kb downstream 10.0kb downstream 3018 false Scaffold12680: 1-3018 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370213 5261 Brassicaceae View MSA
123839810 5264 Brassicales-Malvales View MSA
124339394 5266 SBM View MSA
124241049 5268 Malvidae View MSA
124064481 5270 Rosid View MSA
123740737 5271 Pentapetalae View MSA
122795494 5272 Eudicot View MSA
122042148 5273 Angiosperm View MSA
121350777 5274 Embryophyte View MSA
123427535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain