Gene : Araha.13979s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR22814//PTHR22814:SF150 - COPPER TRANSPORT PROTEIN ATOX1-RELATED Genomic Order:  3
Name:  ? Araha.13979s0003 Secondary Identifier:  ? PAC:28848655

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.13979s0003 0.5kb upstream 0.5kb upstream 2201 true Scaffold13979: 18589-20789 Arabidopsis halleri
Araha.13979s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold13979: 20290-20789 Arabidopsis halleri
Araha.13979s0003 0.5kb downstream 0.5kb downstream 2201 true Scaffold13979: 18089-20289 Arabidopsis halleri
Araha.13979s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold13979: 18089-18588 Arabidopsis halleri
Araha.13979s0003 1.0kb upstream 1.0kb upstream 2701 true Scaffold13979: 18589-21289 Arabidopsis halleri
Araha.13979s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold13979: 20290-21289 Arabidopsis halleri
Araha.13979s0003 1.0kb downstream 1.0kb downstream 2701 true Scaffold13979: 17589-20289 Arabidopsis halleri
Araha.13979s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold13979: 17589-18588 Arabidopsis halleri
Araha.13979s0003 2.0kb upstream 2.0kb upstream 3701 true Scaffold13979: 18589-22289 Arabidopsis halleri
Araha.13979s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold13979: 20290-22289 Arabidopsis halleri
Araha.13979s0003 2.0kb downstream 2.0kb downstream 3701 true Scaffold13979: 16589-20289 Arabidopsis halleri
Araha.13979s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold13979: 16589-18588 Arabidopsis halleri
Araha.13979s0003 5.0kb upstream 5.0kb upstream 3853 true Scaffold13979: 18589-22441 Arabidopsis halleri
Araha.13979s0003 5.0kb upstream 5.0kb upstream 2152 false Scaffold13979: 20290-22441 Arabidopsis halleri
Araha.13979s0003 5.0kb downstream 5.0kb downstream 6701 true Scaffold13979: 13589-20289 Arabidopsis halleri
Araha.13979s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold13979: 13589-18588 Arabidopsis halleri
Araha.13979s0003 10.0kb upstream 10.0kb upstream 3853 true Scaffold13979: 18589-22441 Arabidopsis halleri
Araha.13979s0003 10.0kb upstream 10.0kb upstream 2152 false Scaffold13979: 20290-22441 Arabidopsis halleri
Araha.13979s0003 10.0kb downstream 10.0kb downstream 11701 true Scaffold13979: 8589-20289 Arabidopsis halleri
Araha.13979s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold13979: 8589-18588 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362356 5261 Brassicaceae View MSA
123832692 5264 Brassicales-Malvales View MSA
124340812 5266 SBM View MSA
124241791 5268 Malvidae View MSA
124063089 5270 Rosid View MSA
123750327 5271 Pentapetalae View MSA
122795966 5272 Eudicot View MSA
122049430 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain