Gene : Araha.14182s0005 A. halleri v1.1

Defline:  (1 of 2) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  5
Name:  ? Araha.14182s0005 Secondary Identifier:  ? PAC:28850026

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLUGLNSYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3282 Arabidopsis halleri pathologic  
Ahalleri PWY-6963 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.14182s0005 0.5kb upstream 0.5kb upstream 8600 true Scaffold14182: 42780-51379 Arabidopsis halleri
Araha.14182s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold14182: 42780-43279 Arabidopsis halleri
Araha.14182s0005 0.5kb downstream 0.5kb downstream 8600 true Scaffold14182: 43280-51879 Arabidopsis halleri
Araha.14182s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold14182: 51380-51879 Arabidopsis halleri
Araha.14182s0005 1.0kb upstream 1.0kb upstream 9100 true Scaffold14182: 42280-51379 Arabidopsis halleri
Araha.14182s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold14182: 42280-43279 Arabidopsis halleri
Araha.14182s0005 1.0kb downstream 1.0kb downstream 9100 true Scaffold14182: 43280-52379 Arabidopsis halleri
Araha.14182s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold14182: 51380-52379 Arabidopsis halleri
Araha.14182s0005 2.0kb upstream 2.0kb upstream 10100 true Scaffold14182: 41280-51379 Arabidopsis halleri
Araha.14182s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold14182: 41280-43279 Arabidopsis halleri
Araha.14182s0005 2.0kb downstream 2.0kb downstream 10100 true Scaffold14182: 43280-53379 Arabidopsis halleri
Araha.14182s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold14182: 51380-53379 Arabidopsis halleri
Araha.14182s0005 5.0kb upstream 5.0kb upstream 13100 true Scaffold14182: 38280-51379 Arabidopsis halleri
Araha.14182s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold14182: 38280-43279 Arabidopsis halleri
Araha.14182s0005 5.0kb downstream 5.0kb downstream 12378 true Scaffold14182: 43280-55657 Arabidopsis halleri
Araha.14182s0005 5.0kb downstream 5.0kb downstream 4278 false Scaffold14182: 51380-55657 Arabidopsis halleri
Araha.14182s0005 10.0kb upstream 10.0kb upstream 18100 true Scaffold14182: 33280-51379 Arabidopsis halleri
Araha.14182s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold14182: 33280-43279 Arabidopsis halleri
Araha.14182s0005 10.0kb downstream 10.0kb downstream 12378 true Scaffold14182: 43280-55657 Arabidopsis halleri
Araha.14182s0005 10.0kb downstream 10.0kb downstream 4278 false Scaffold14182: 51380-55657 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366728 5261 Brassicaceae View MSA
123832225 5264 Brassicales-Malvales View MSA
124341222 5266 SBM View MSA
124241008 5268 Malvidae View MSA
124067049 5270 Rosid View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain