Gene : Araha.15091s0001 A. halleri v1.1

Defline:  (1 of 3) KOG3377 - Uncharacterized conserved protein Genomic Order:  1
Name:  ? Araha.15091s0001 Secondary Identifier:  ? PAC:28840458

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.15091s0001 0.5kb upstream 0.5kb upstream 2175 true Scaffold15091: 245-2419 Arabidopsis halleri
Araha.15091s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold15091: 1920-2419 Arabidopsis halleri
Araha.15091s0001 0.5kb downstream 0.5kb downstream 1919 true Scaffold15091: 1-1919 Arabidopsis halleri
Araha.15091s0001 0.5kb downstream 0.5kb downstream 244 false Scaffold15091: 1-244 Arabidopsis halleri
Araha.15091s0001 1.0kb upstream 1.0kb upstream 2675 true Scaffold15091: 245-2919 Arabidopsis halleri
Araha.15091s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold15091: 1920-2919 Arabidopsis halleri
Araha.15091s0001 1.0kb downstream 1.0kb downstream 1919 true Scaffold15091: 1-1919 Arabidopsis halleri
Araha.15091s0001 1.0kb downstream 1.0kb downstream 244 false Scaffold15091: 1-244 Arabidopsis halleri
Araha.15091s0001 2.0kb upstream 2.0kb upstream 3675 true Scaffold15091: 245-3919 Arabidopsis halleri
Araha.15091s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold15091: 1920-3919 Arabidopsis halleri
Araha.15091s0001 2.0kb downstream 2.0kb downstream 1919 true Scaffold15091: 1-1919 Arabidopsis halleri
Araha.15091s0001 2.0kb downstream 2.0kb downstream 244 false Scaffold15091: 1-244 Arabidopsis halleri
Araha.15091s0001 5.0kb upstream 5.0kb upstream 6675 true Scaffold15091: 245-6919 Arabidopsis halleri
Araha.15091s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold15091: 1920-6919 Arabidopsis halleri
Araha.15091s0001 5.0kb downstream 5.0kb downstream 1919 true Scaffold15091: 1-1919 Arabidopsis halleri
Araha.15091s0001 5.0kb downstream 5.0kb downstream 244 false Scaffold15091: 1-244 Arabidopsis halleri
Araha.15091s0001 10.0kb upstream 10.0kb upstream 11675 true Scaffold15091: 245-11919 Arabidopsis halleri
Araha.15091s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold15091: 1920-11919 Arabidopsis halleri
Araha.15091s0001 10.0kb downstream 10.0kb downstream 1919 true Scaffold15091: 1-1919 Arabidopsis halleri
Araha.15091s0001 10.0kb downstream 10.0kb downstream 244 false Scaffold15091: 1-244 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366238 5261 Brassicaceae View MSA
123835528 5264 Brassicales-Malvales View MSA
124342438 5266 SBM View MSA
124241452 5268 Malvidae View MSA
124060709 5270 Rosid View MSA
123738503 5271 Pentapetalae View MSA
122790756 5272 Eudicot View MSA
122042648 5273 Angiosperm View MSA
121351365 5274 Embryophyte View MSA
123425243 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain