Gene : Araha.7037s0003 A. halleri v1.1

Defline:  (1 of 160) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3
Name:  ? Araha.7037s0003 Secondary Identifier:  ? PAC:28850540

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7037s0003 0.5kb upstream 0.5kb upstream 1856 true Scaffold7037: 3797-5652 Arabidopsis halleri
Araha.7037s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold7037: 3797-4296 Arabidopsis halleri
Araha.7037s0003 0.5kb downstream 0.5kb downstream 1856 true Scaffold7037: 4297-6152 Arabidopsis halleri
Araha.7037s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold7037: 5653-6152 Arabidopsis halleri
Araha.7037s0003 1.0kb upstream 1.0kb upstream 2356 true Scaffold7037: 3297-5652 Arabidopsis halleri
Araha.7037s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold7037: 3297-4296 Arabidopsis halleri
Araha.7037s0003 1.0kb downstream 1.0kb downstream 2356 true Scaffold7037: 4297-6652 Arabidopsis halleri
Araha.7037s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold7037: 5653-6652 Arabidopsis halleri
Araha.7037s0003 2.0kb upstream 2.0kb upstream 3356 true Scaffold7037: 2297-5652 Arabidopsis halleri
Araha.7037s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold7037: 2297-4296 Arabidopsis halleri
Araha.7037s0003 2.0kb downstream 2.0kb downstream 3356 true Scaffold7037: 4297-7652 Arabidopsis halleri
Araha.7037s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold7037: 5653-7652 Arabidopsis halleri
Araha.7037s0003 5.0kb upstream 5.0kb upstream 5652 true Scaffold7037: 1-5652 Arabidopsis halleri
Araha.7037s0003 5.0kb upstream 5.0kb upstream 4296 false Scaffold7037: 1-4296 Arabidopsis halleri
Araha.7037s0003 5.0kb downstream 5.0kb downstream 6356 true Scaffold7037: 4297-10652 Arabidopsis halleri
Araha.7037s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold7037: 5653-10652 Arabidopsis halleri
Araha.7037s0003 10.0kb upstream 10.0kb upstream 5652 true Scaffold7037: 1-5652 Arabidopsis halleri
Araha.7037s0003 10.0kb upstream 10.0kb upstream 4296 false Scaffold7037: 1-4296 Arabidopsis halleri
Araha.7037s0003 10.0kb downstream 10.0kb downstream 11356 true Scaffold7037: 4297-15652 Arabidopsis halleri
Araha.7037s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold7037: 5653-15652 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365188 5261 Brassicaceae View MSA
123798911 5264 Brassicales-Malvales View MSA
124346450 5266 SBM View MSA
124243436 5268 Malvidae View MSA
124074689 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain