Gene : Araha.7189s0006 A. halleri v1.1

Defline:  (1 of 1) PTHR13405:SF11 - NUCLEAR PORE COMPLEX PROTEIN NUP133 Genomic Order:  6
Name:  ? Araha.7189s0006 Secondary Identifier:  ? PAC:28853341

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7189s0006 0.5kb upstream 0.5kb upstream 4485 true Scaffold7189: 19611-24095 Arabidopsis halleri
Araha.7189s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold7189: 23596-24095 Arabidopsis halleri
Araha.7189s0006 0.5kb downstream 0.5kb downstream 4485 true Scaffold7189: 19111-23595 Arabidopsis halleri
Araha.7189s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold7189: 19111-19610 Arabidopsis halleri
Araha.7189s0006 1.0kb upstream 1.0kb upstream 4985 true Scaffold7189: 19611-24595 Arabidopsis halleri
Araha.7189s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold7189: 23596-24595 Arabidopsis halleri
Araha.7189s0006 1.0kb downstream 1.0kb downstream 4985 true Scaffold7189: 18611-23595 Arabidopsis halleri
Araha.7189s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold7189: 18611-19610 Arabidopsis halleri
Araha.7189s0006 2.0kb upstream 2.0kb upstream 5985 true Scaffold7189: 19611-25595 Arabidopsis halleri
Araha.7189s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold7189: 23596-25595 Arabidopsis halleri
Araha.7189s0006 2.0kb downstream 2.0kb downstream 5985 true Scaffold7189: 17611-23595 Arabidopsis halleri
Araha.7189s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold7189: 17611-19610 Arabidopsis halleri
Araha.7189s0006 5.0kb upstream 5.0kb upstream 8985 true Scaffold7189: 19611-28595 Arabidopsis halleri
Araha.7189s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold7189: 23596-28595 Arabidopsis halleri
Araha.7189s0006 5.0kb downstream 5.0kb downstream 8985 true Scaffold7189: 14611-23595 Arabidopsis halleri
Araha.7189s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold7189: 14611-19610 Arabidopsis halleri
Araha.7189s0006 10.0kb upstream 10.0kb upstream 13985 true Scaffold7189: 19611-33595 Arabidopsis halleri
Araha.7189s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold7189: 23596-33595 Arabidopsis halleri
Araha.7189s0006 10.0kb downstream 10.0kb downstream 13985 true Scaffold7189: 9611-23595 Arabidopsis halleri
Araha.7189s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold7189: 9611-19610 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372288 5261 Brassicaceae View MSA
123830399 5264 Brassicales-Malvales View MSA
124343300 5266 SBM View MSA
124240914 5268 Malvidae View MSA
124065950 5270 Rosid View MSA
123739362 5271 Pentapetalae View MSA
122792648 5272 Eudicot View MSA
122045150 5273 Angiosperm View MSA
121345241 5274 Embryophyte View MSA
123424593 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain