Gene : Araha.16220s0008 A. halleri v1.1
Defline:  (1 of 2) PTHR11801 - SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION Genomic Order:  8
Name:  ? Araha.16220s0008 Secondary Identifier:  ? PAC:28860957
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16220s0008 0.5kb upstream 0.5kb upstream 4446 true Scaffold16220: 29372-33817 Arabidopsis halleri
Araha.16220s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold16220: 29372-29871 Arabidopsis halleri
Araha.16220s0008 0.5kb downstream 0.5kb downstream 4446 true Scaffold16220: 29872-34317 Arabidopsis halleri
Araha.16220s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold16220: 33818-34317 Arabidopsis halleri
Araha.16220s0008 1.0kb upstream 1.0kb upstream 4946 true Scaffold16220: 28872-33817 Arabidopsis halleri
Araha.16220s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold16220: 28872-29871 Arabidopsis halleri
Araha.16220s0008 1.0kb downstream 1.0kb downstream 4946 true Scaffold16220: 29872-34817 Arabidopsis halleri
Araha.16220s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold16220: 33818-34817 Arabidopsis halleri
Araha.16220s0008 2.0kb upstream 2.0kb upstream 5946 true Scaffold16220: 27872-33817 Arabidopsis halleri
Araha.16220s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold16220: 27872-29871 Arabidopsis halleri
Araha.16220s0008 2.0kb downstream 2.0kb downstream 5946 true Scaffold16220: 29872-35817 Arabidopsis halleri
Araha.16220s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold16220: 33818-35817 Arabidopsis halleri
Araha.16220s0008 5.0kb upstream 5.0kb upstream 8946 true Scaffold16220: 24872-33817 Arabidopsis halleri
Araha.16220s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold16220: 24872-29871 Arabidopsis halleri
Araha.16220s0008 5.0kb downstream 5.0kb downstream 8946 true Scaffold16220: 29872-38817 Arabidopsis halleri
Araha.16220s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold16220: 33818-38817 Arabidopsis halleri
Araha.16220s0008 10.0kb upstream 10.0kb upstream 13946 true Scaffold16220: 19872-33817 Arabidopsis halleri
Araha.16220s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold16220: 19872-29871 Arabidopsis halleri
Araha.16220s0008 10.0kb downstream 10.0kb downstream 13946 true Scaffold16220: 29872-43817 Arabidopsis halleri
Araha.16220s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold16220: 33818-43817 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376558 5261 Brassicaceae View MSA
123837315 5264 Brassicales-Malvales View MSA
124342395 5266 SBM View MSA
124238773 5268 Malvidae View MSA
124067056 5270 Rosid View MSA
123736368 5271 Pentapetalae View MSA
122785651 5272 Eudicot View MSA
122044134 5273 Angiosperm View MSA
121347247 5274 Embryophyte View MSA
123380519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain