Gene : Araha.16153s0006 A. halleri v1.1
Defline:  (1 of 1) PTHR11709:SF22 - LACCASE-12-RELATED Genomic Order:  6
Name:  ? Araha.16153s0006 Secondary Identifier:  ? PAC:28862403
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5466 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16153s0006 0.5kb upstream 0.5kb upstream 2833 true Scaffold16153: 14969-17801 Arabidopsis halleri
Araha.16153s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold16153: 14969-15468 Arabidopsis halleri
Araha.16153s0006 0.5kb downstream 0.5kb downstream 2833 true Scaffold16153: 15469-18301 Arabidopsis halleri
Araha.16153s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold16153: 17802-18301 Arabidopsis halleri
Araha.16153s0006 1.0kb upstream 1.0kb upstream 3333 true Scaffold16153: 14469-17801 Arabidopsis halleri
Araha.16153s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold16153: 14469-15468 Arabidopsis halleri
Araha.16153s0006 1.0kb downstream 1.0kb downstream 3333 true Scaffold16153: 15469-18801 Arabidopsis halleri
Araha.16153s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold16153: 17802-18801 Arabidopsis halleri
Araha.16153s0006 2.0kb upstream 2.0kb upstream 4333 true Scaffold16153: 13469-17801 Arabidopsis halleri
Araha.16153s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold16153: 13469-15468 Arabidopsis halleri
Araha.16153s0006 2.0kb downstream 2.0kb downstream 4333 true Scaffold16153: 15469-19801 Arabidopsis halleri
Araha.16153s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold16153: 17802-19801 Arabidopsis halleri
Araha.16153s0006 5.0kb upstream 5.0kb upstream 7333 true Scaffold16153: 10469-17801 Arabidopsis halleri
Araha.16153s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold16153: 10469-15468 Arabidopsis halleri
Araha.16153s0006 5.0kb downstream 5.0kb downstream 4859 true Scaffold16153: 15469-20327 Arabidopsis halleri
Araha.16153s0006 5.0kb downstream 5.0kb downstream 2526 false Scaffold16153: 17802-20327 Arabidopsis halleri
Araha.16153s0006 10.0kb upstream 10.0kb upstream 12333 true Scaffold16153: 5469-17801 Arabidopsis halleri
Araha.16153s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold16153: 5469-15468 Arabidopsis halleri
Araha.16153s0006 10.0kb downstream 10.0kb downstream 4859 true Scaffold16153: 15469-20327 Arabidopsis halleri
Araha.16153s0006 10.0kb downstream 10.0kb downstream 2526 false Scaffold16153: 17802-20327 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375809 5261 Brassicaceae View MSA
123837056 5264 Brassicales-Malvales View MSA
124338843 5266 SBM View MSA
124253319 5268 Malvidae View MSA
124063263 5270 Rosid View MSA
123746086 5271 Pentapetalae View MSA
122788360 5272 Eudicot View MSA
122044394 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain