Gene : Araha.7111s0003 A. halleri v1.1
Defline:  (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED Genomic Order:  3
Name:  ? Araha.7111s0003 Secondary Identifier:  ? PAC:28846728
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7111s0003 0.5kb upstream 0.5kb upstream 2942 true Scaffold7111: 12409-15350 Arabidopsis halleri
Araha.7111s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold7111: 12409-12908 Arabidopsis halleri
Araha.7111s0003 0.5kb downstream 0.5kb downstream 2942 true Scaffold7111: 12909-15850 Arabidopsis halleri
Araha.7111s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold7111: 15351-15850 Arabidopsis halleri
Araha.7111s0003 1.0kb upstream 1.0kb upstream 3442 true Scaffold7111: 11909-15350 Arabidopsis halleri
Araha.7111s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold7111: 11909-12908 Arabidopsis halleri
Araha.7111s0003 1.0kb downstream 1.0kb downstream 3442 true Scaffold7111: 12909-16350 Arabidopsis halleri
Araha.7111s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold7111: 15351-16350 Arabidopsis halleri
Araha.7111s0003 2.0kb upstream 2.0kb upstream 4442 true Scaffold7111: 10909-15350 Arabidopsis halleri
Araha.7111s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold7111: 10909-12908 Arabidopsis halleri
Araha.7111s0003 2.0kb downstream 2.0kb downstream 4442 true Scaffold7111: 12909-17350 Arabidopsis halleri
Araha.7111s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold7111: 15351-17350 Arabidopsis halleri
Araha.7111s0003 5.0kb upstream 5.0kb upstream 7442 true Scaffold7111: 7909-15350 Arabidopsis halleri
Araha.7111s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold7111: 7909-12908 Arabidopsis halleri
Araha.7111s0003 5.0kb downstream 5.0kb downstream 7442 true Scaffold7111: 12909-20350 Arabidopsis halleri
Araha.7111s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold7111: 15351-20350 Arabidopsis halleri
Araha.7111s0003 10.0kb upstream 10.0kb upstream 12442 true Scaffold7111: 2909-15350 Arabidopsis halleri
Araha.7111s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold7111: 2909-12908 Arabidopsis halleri
Araha.7111s0003 10.0kb downstream 10.0kb downstream 12442 true Scaffold7111: 12909-25350 Arabidopsis halleri
Araha.7111s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold7111: 15351-25350 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368990 5261 Brassicaceae View MSA
123838007 5264 Brassicales-Malvales View MSA
124346929 5266 SBM View MSA
124251426 5268 Malvidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain