Protein Family : polygalacturonase abscission zone A. thaliana 124346929

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  22

22 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g040962m.g (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. sinensis v1.1 744   scaffold00206: 273336-274079
AT3G57510 (1 of 2) PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED A. thaliana TAIR10 ADPG1 2604   Chr3: 21283338-21285941
AT2G41850 (1 of 2) PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED A. thaliana TAIR10 PGAZAT 2507   Chr2: 17461655-17464161
Thhalv10016680m.g (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED E. salsugineum v1.0 2161   scaffold_10: 11394293-11396453
Thhalv10005982m.g (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED E. salsugineum v1.0 2604   scaffold_19: 2129936-2132539
Ciclev10005317m.g (1 of 1) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED C. clementina v1.0 2515   scaffold_9: 25064865-25067379
Gorai.006G137600 (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED G. raimondii v2.1 3073   Chr06: 39384754-39387826
Gorai.007G360000 (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED G. raimondii v2.1 4549   Chr07: 59114593-59119141
Thecc1EG024714 (1 of 2) PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED T. cacao v1.1 2861   scaffold_5: 28036720-28039580
Thecc1EG024715 (1 of 2) PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED T. cacao v1.1 5211   scaffold_5: 28039700-28044910
Araha.15695s0002 (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED A. halleri v1.1 2344   Scaffold15695: 4445-6788
Araha.7111s0003 (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED A. halleri v1.1 2442   Scaffold7111: 12909-15350
Cagra.0578s0080 (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED C. grandiflora v1.1 2347   Scaffold578: 305668-308014
Cagra.8287s0002 (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED C. grandiflora v1.1 2152   Scaffold8287: 6542-8693
Brara.G01742 (1 of 5) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED B. rapa FPsc v1.3 2322   A07: 16704087-16706408
Brara.D02544 (1 of 5) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED B. rapa FPsc v1.3 2394   A04: 19867830-19870223
Bostr.20903s0004 (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED B. stricta v1.2 2598   Scaffold20903: 15189-17786
Bostr.25993s0596 (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED B. stricta v1.2 2180   Scaffold25993: 2904355-2906534
AL4G40180 (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED A. lyrata v2.1 2441   scaffold_4: 20472159-20474599
AL5G39090 (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED A. lyrata v2.1 2675   scaffold_5: 18440385-18443059
Carub.0004s2415 (1 of 2) PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED C. rubella v1.1 2164   scaffold_4: 12595166-12597329
Carub.0005s2435 (1 of 2) PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED C. rubella v1.1 2425   scaffold_5: 11566316-11568740

22 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g040962m C. sinensis v1.1 124346929 polygalacturonase abscission zone A. thaliana 1 5266 SBM
AT3G57510.1 A. thaliana TAIR10 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Thhalv10016680m E. salsugineum v1.0 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Gorai.006G137600.1 G. raimondii v2.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Bostr.25993s0596.1.p B. stricta v1.2 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
AL5G39090.t1 A. lyrata v2.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
AL4G40180.t1 A. lyrata v2.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Carub.0004s2415.1.p C. rubella v1.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
AT2G41850.1 A. thaliana TAIR10 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Thhalv10005982m E. salsugineum v1.0 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Ciclev10005317m C. clementina v1.0 124346929 polygalacturonase abscission zone A. thaliana 1 5266 SBM
Gorai.007G360000.1 G. raimondii v2.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Thecc1EG024715t1 T. cacao v1.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Thecc1EG024714t1 T. cacao v1.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Araha.7111s0003.1.p A. halleri v1.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Araha.15695s0002.1.p A. halleri v1.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Cagra.0578s0080.1.p C. grandiflora v1.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Cagra.8287s0002.1.p C. grandiflora v1.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Brara.D02544.1.p B. rapa FPsc v1.3 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Brara.G01742.1.p B. rapa FPsc v1.3 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Bostr.20903s0004.1.p B. stricta v1.2 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM
Carub.0005s2435.1.p C. rubella v1.1 124346929 polygalacturonase abscission zone A. thaliana 2 5266 SBM