Gene : orange1.1g040962m.g C. sinensis v1.1
Defline:  (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Genomic Order:  13
Name:  ? orange1.1g040962m.g Secondary Identifier:  ? PAC:18123428
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1081 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g040962m.g 0.5kb upstream 0.5kb upstream 874 true scaffold00206: 273336-274209 Citrus sinensis
orange1.1g040962m.g 0.5kb upstream 0.5kb upstream 130 false scaffold00206: 274080-274209 Citrus sinensis
orange1.1g040962m.g 0.5kb downstream 0.5kb downstream 1244 true scaffold00206: 272836-274079 Citrus sinensis
orange1.1g040962m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00206: 272836-273335 Citrus sinensis
orange1.1g040962m.g 1.0kb upstream 1.0kb upstream 874 true scaffold00206: 273336-274209 Citrus sinensis
orange1.1g040962m.g 1.0kb upstream 1.0kb upstream 130 false scaffold00206: 274080-274209 Citrus sinensis
orange1.1g040962m.g 1.0kb downstream 1.0kb downstream 1744 true scaffold00206: 272336-274079 Citrus sinensis
orange1.1g040962m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00206: 272336-273335 Citrus sinensis
orange1.1g040962m.g 2.0kb upstream 2.0kb upstream 874 true scaffold00206: 273336-274209 Citrus sinensis
orange1.1g040962m.g 2.0kb upstream 2.0kb upstream 130 false scaffold00206: 274080-274209 Citrus sinensis
orange1.1g040962m.g 2.0kb downstream 2.0kb downstream 2744 true scaffold00206: 271336-274079 Citrus sinensis
orange1.1g040962m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00206: 271336-273335 Citrus sinensis
orange1.1g040962m.g 5.0kb upstream 5.0kb upstream 874 true scaffold00206: 273336-274209 Citrus sinensis
orange1.1g040962m.g 5.0kb upstream 5.0kb upstream 130 false scaffold00206: 274080-274209 Citrus sinensis
orange1.1g040962m.g 5.0kb downstream 5.0kb downstream 5744 true scaffold00206: 268336-274079 Citrus sinensis
orange1.1g040962m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00206: 268336-273335 Citrus sinensis
orange1.1g040962m.g 10.0kb upstream 10.0kb upstream 874 true scaffold00206: 273336-274209 Citrus sinensis
orange1.1g040962m.g 10.0kb upstream 10.0kb upstream 130 false scaffold00206: 274080-274209 Citrus sinensis
orange1.1g040962m.g 10.0kb downstream 10.0kb downstream 10744 true scaffold00206: 263336-274079 Citrus sinensis
orange1.1g040962m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00206: 263336-273335 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346929 5266 SBM View MSA
124251426 5268 Malvidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain