Gene : Gorai.006G137600 G. raimondii v2.1
Defline:  (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED Genomic Order:  1376
Name:  ? Gorai.006G137600 Secondary Identifier:  ? PAC:26834502
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G137600 0.5kb upstream 0.5kb upstream 3573 true Chr06: 39384754-39388326 Gossypium raimondii
Gorai.006G137600 0.5kb upstream 0.5kb upstream 500 false Chr06: 39387827-39388326 Gossypium raimondii
Gorai.006G137600 0.5kb downstream 0.5kb downstream 3573 true Chr06: 39384254-39387826 Gossypium raimondii
Gorai.006G137600 0.5kb downstream 0.5kb downstream 500 false Chr06: 39384254-39384753 Gossypium raimondii
Gorai.006G137600 1.0kb upstream 1.0kb upstream 4073 true Chr06: 39384754-39388826 Gossypium raimondii
Gorai.006G137600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 39387827-39388826 Gossypium raimondii
Gorai.006G137600 1.0kb downstream 1.0kb downstream 4073 true Chr06: 39383754-39387826 Gossypium raimondii
Gorai.006G137600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 39383754-39384753 Gossypium raimondii
Gorai.006G137600 2.0kb upstream 2.0kb upstream 5073 true Chr06: 39384754-39389826 Gossypium raimondii
Gorai.006G137600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 39387827-39389826 Gossypium raimondii
Gorai.006G137600 2.0kb downstream 2.0kb downstream 5073 true Chr06: 39382754-39387826 Gossypium raimondii
Gorai.006G137600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 39382754-39384753 Gossypium raimondii
Gorai.006G137600 5.0kb upstream 5.0kb upstream 8073 true Chr06: 39384754-39392826 Gossypium raimondii
Gorai.006G137600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 39387827-39392826 Gossypium raimondii
Gorai.006G137600 5.0kb downstream 5.0kb downstream 8073 true Chr06: 39379754-39387826 Gossypium raimondii
Gorai.006G137600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 39379754-39384753 Gossypium raimondii
Gorai.006G137600 10.0kb upstream 10.0kb upstream 13073 true Chr06: 39384754-39397826 Gossypium raimondii
Gorai.006G137600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 39387827-39397826 Gossypium raimondii
Gorai.006G137600 10.0kb downstream 10.0kb downstream 13073 true Chr06: 39374754-39387826 Gossypium raimondii
Gorai.006G137600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 39374754-39384753 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838007 5264 Brassicales-Malvales View MSA
124346929 5266 SBM View MSA
124251426 5268 Malvidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain