Gene : Araha.15695s0002 A. halleri v1.1
Defline:  (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED Genomic Order:  2
Name:  ? Araha.15695s0002 Secondary Identifier:  ? PAC:28862557
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.15695s0002 0.5kb upstream 0.5kb upstream 2844 true Scaffold15695: 4445-7288 Arabidopsis halleri
Araha.15695s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold15695: 6789-7288 Arabidopsis halleri
Araha.15695s0002 0.5kb downstream 0.5kb downstream 2844 true Scaffold15695: 3945-6788 Arabidopsis halleri
Araha.15695s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold15695: 3945-4444 Arabidopsis halleri
Araha.15695s0002 1.0kb upstream 1.0kb upstream 3344 true Scaffold15695: 4445-7788 Arabidopsis halleri
Araha.15695s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold15695: 6789-7788 Arabidopsis halleri
Araha.15695s0002 1.0kb downstream 1.0kb downstream 3344 true Scaffold15695: 3445-6788 Arabidopsis halleri
Araha.15695s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold15695: 3445-4444 Arabidopsis halleri
Araha.15695s0002 2.0kb upstream 2.0kb upstream 4344 true Scaffold15695: 4445-8788 Arabidopsis halleri
Araha.15695s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold15695: 6789-8788 Arabidopsis halleri
Araha.15695s0002 2.0kb downstream 2.0kb downstream 4344 true Scaffold15695: 2445-6788 Arabidopsis halleri
Araha.15695s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold15695: 2445-4444 Arabidopsis halleri
Araha.15695s0002 5.0kb upstream 5.0kb upstream 7344 true Scaffold15695: 4445-11788 Arabidopsis halleri
Araha.15695s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold15695: 6789-11788 Arabidopsis halleri
Araha.15695s0002 5.0kb downstream 5.0kb downstream 6788 true Scaffold15695: 1-6788 Arabidopsis halleri
Araha.15695s0002 5.0kb downstream 5.0kb downstream 4444 false Scaffold15695: 1-4444 Arabidopsis halleri
Araha.15695s0002 10.0kb upstream 10.0kb upstream 12344 true Scaffold15695: 4445-16788 Arabidopsis halleri
Araha.15695s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold15695: 6789-16788 Arabidopsis halleri
Araha.15695s0002 10.0kb downstream 10.0kb downstream 6788 true Scaffold15695: 1-6788 Arabidopsis halleri
Araha.15695s0002 10.0kb downstream 10.0kb downstream 4444 false Scaffold15695: 1-4444 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361391 5261 Brassicaceae View MSA
123838007 5264 Brassicales-Malvales View MSA
124346929 5266 SBM View MSA
124251426 5268 Malvidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain