Gene : Araha.16035s0005 A. halleri v1.1

Defline:  (1 of 2) PTHR22765:SF58 - VACUOLAR-SORTING RECEPTOR 1-RELATED Genomic Order:  5
Name:  ? Araha.16035s0005 Secondary Identifier:  ? PAC:28845352

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.16035s0005 0.5kb upstream 0.5kb upstream 3381 true Scaffold16035: 16635-20015 Arabidopsis halleri
Araha.16035s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold16035: 16635-17134 Arabidopsis halleri
Araha.16035s0005 0.5kb downstream 0.5kb downstream 3381 true Scaffold16035: 17135-20515 Arabidopsis halleri
Araha.16035s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold16035: 20016-20515 Arabidopsis halleri
Araha.16035s0005 1.0kb upstream 1.0kb upstream 3881 true Scaffold16035: 16135-20015 Arabidopsis halleri
Araha.16035s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold16035: 16135-17134 Arabidopsis halleri
Araha.16035s0005 1.0kb downstream 1.0kb downstream 3881 true Scaffold16035: 17135-21015 Arabidopsis halleri
Araha.16035s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold16035: 20016-21015 Arabidopsis halleri
Araha.16035s0005 2.0kb upstream 2.0kb upstream 4881 true Scaffold16035: 15135-20015 Arabidopsis halleri
Araha.16035s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold16035: 15135-17134 Arabidopsis halleri
Araha.16035s0005 2.0kb downstream 2.0kb downstream 4881 true Scaffold16035: 17135-22015 Arabidopsis halleri
Araha.16035s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold16035: 20016-22015 Arabidopsis halleri
Araha.16035s0005 5.0kb upstream 5.0kb upstream 7881 true Scaffold16035: 12135-20015 Arabidopsis halleri
Araha.16035s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold16035: 12135-17134 Arabidopsis halleri
Araha.16035s0005 5.0kb downstream 5.0kb downstream 7881 true Scaffold16035: 17135-25015 Arabidopsis halleri
Araha.16035s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold16035: 20016-25015 Arabidopsis halleri
Araha.16035s0005 10.0kb upstream 10.0kb upstream 12881 true Scaffold16035: 7135-20015 Arabidopsis halleri
Araha.16035s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold16035: 7135-17134 Arabidopsis halleri
Araha.16035s0005 10.0kb downstream 10.0kb downstream 7888 true Scaffold16035: 17135-25022 Arabidopsis halleri
Araha.16035s0005 10.0kb downstream 10.0kb downstream 5007 false Scaffold16035: 20016-25022 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372160 5261 Brassicaceae View MSA
123839164 5264 Brassicales-Malvales View MSA
124337452 5266 SBM View MSA
124239703 5268 Malvidae View MSA
124068352 5270 Rosid View MSA
123747014 5271 Pentapetalae View MSA
122793065 5272 Eudicot View MSA
122047431 5273 Angiosperm View MSA
121350422 5274 Embryophyte View MSA
123428728 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain