Gene : Araha.17647s0001 A. halleri v1.1

Defline:  (1 of 5) PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED Genomic Order:  1
Name:  ? Araha.17647s0001 Secondary Identifier:  ? PAC:28840645

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.17647s0001 0.5kb upstream 0.5kb upstream 4102 true Scaffold17647: 5038-9139 Arabidopsis halleri
Araha.17647s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold17647: 8640-9139 Arabidopsis halleri
Araha.17647s0001 0.5kb downstream 0.5kb downstream 4102 true Scaffold17647: 4538-8639 Arabidopsis halleri
Araha.17647s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold17647: 4538-5037 Arabidopsis halleri
Araha.17647s0001 1.0kb upstream 1.0kb upstream 4602 true Scaffold17647: 5038-9639 Arabidopsis halleri
Araha.17647s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold17647: 8640-9639 Arabidopsis halleri
Araha.17647s0001 1.0kb downstream 1.0kb downstream 4602 true Scaffold17647: 4038-8639 Arabidopsis halleri
Araha.17647s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold17647: 4038-5037 Arabidopsis halleri
Araha.17647s0001 2.0kb upstream 2.0kb upstream 5602 true Scaffold17647: 5038-10639 Arabidopsis halleri
Araha.17647s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold17647: 8640-10639 Arabidopsis halleri
Araha.17647s0001 2.0kb downstream 2.0kb downstream 5602 true Scaffold17647: 3038-8639 Arabidopsis halleri
Araha.17647s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold17647: 3038-5037 Arabidopsis halleri
Araha.17647s0001 5.0kb upstream 5.0kb upstream 8602 true Scaffold17647: 5038-13639 Arabidopsis halleri
Araha.17647s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold17647: 8640-13639 Arabidopsis halleri
Araha.17647s0001 5.0kb downstream 5.0kb downstream 8602 true Scaffold17647: 38-8639 Arabidopsis halleri
Araha.17647s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold17647: 38-5037 Arabidopsis halleri
Araha.17647s0001 10.0kb upstream 10.0kb upstream 13602 true Scaffold17647: 5038-18639 Arabidopsis halleri
Araha.17647s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold17647: 8640-18639 Arabidopsis halleri
Araha.17647s0001 10.0kb downstream 10.0kb downstream 8639 true Scaffold17647: 1-8639 Arabidopsis halleri
Araha.17647s0001 10.0kb downstream 10.0kb downstream 5037 false Scaffold17647: 1-5037 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363500 5261 Brassicaceae View MSA
123841459 5264 Brassicales-Malvales View MSA
124345367 5266 SBM View MSA
124249647 5268 Malvidae View MSA
124070544 5270 Rosid View MSA
123741893 5271 Pentapetalae View MSA
122797353 5272 Eudicot View MSA
122046831 5273 Angiosperm View MSA
121349622 5274 Embryophyte View MSA
123428043 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain