Gene : Araha.17479s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR22814//PTHR22814:SF157 - COPPER TRANSPORT PROTEIN ATOX1-RELATED Genomic Order:  3
Name:  ? Araha.17479s0003 Secondary Identifier:  ? PAC:28841782

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.17479s0003 0.5kb upstream 0.5kb upstream 1236 true Scaffold17479: 15143-16378 Arabidopsis halleri
Araha.17479s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold17479: 15143-15642 Arabidopsis halleri
Araha.17479s0003 0.5kb downstream 0.5kb downstream 1236 true Scaffold17479: 15643-16878 Arabidopsis halleri
Araha.17479s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold17479: 16379-16878 Arabidopsis halleri
Araha.17479s0003 1.0kb upstream 1.0kb upstream 1736 true Scaffold17479: 14643-16378 Arabidopsis halleri
Araha.17479s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold17479: 14643-15642 Arabidopsis halleri
Araha.17479s0003 1.0kb downstream 1.0kb downstream 1736 true Scaffold17479: 15643-17378 Arabidopsis halleri
Araha.17479s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold17479: 16379-17378 Arabidopsis halleri
Araha.17479s0003 2.0kb upstream 2.0kb upstream 2736 true Scaffold17479: 13643-16378 Arabidopsis halleri
Araha.17479s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold17479: 13643-15642 Arabidopsis halleri
Araha.17479s0003 2.0kb downstream 2.0kb downstream 2736 true Scaffold17479: 15643-18378 Arabidopsis halleri
Araha.17479s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold17479: 16379-18378 Arabidopsis halleri
Araha.17479s0003 5.0kb upstream 5.0kb upstream 5736 true Scaffold17479: 10643-16378 Arabidopsis halleri
Araha.17479s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold17479: 10643-15642 Arabidopsis halleri
Araha.17479s0003 5.0kb downstream 5.0kb downstream 5736 true Scaffold17479: 15643-21378 Arabidopsis halleri
Araha.17479s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold17479: 16379-21378 Arabidopsis halleri
Araha.17479s0003 10.0kb upstream 10.0kb upstream 10736 true Scaffold17479: 5643-16378 Arabidopsis halleri
Araha.17479s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold17479: 5643-15642 Arabidopsis halleri
Araha.17479s0003 10.0kb downstream 10.0kb downstream 7440 true Scaffold17479: 15643-23082 Arabidopsis halleri
Araha.17479s0003 10.0kb downstream 10.0kb downstream 6704 false Scaffold17479: 16379-23082 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366134 5261 Brassicaceae View MSA
123827767 5264 Brassicales-Malvales View MSA
124350127 5266 SBM View MSA
124254447 5268 Malvidae View MSA
124072357 5270 Rosid View MSA
123753587 5271 Pentapetalae View MSA
122796697 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain