Gene : Araha.17461s0005 A. halleri v1.1
Defline:  (1 of 1) PTHR10949:SF12 - LIPOYL SYNTHASE, CHLOROPLASTIC Genomic Order:  5
Name:  ? Araha.17461s0005 Secondary Identifier:  ? PAC:28854521
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY0-501 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.17461s0005 0.5kb upstream 0.5kb upstream 2833 true Scaffold17461: 14230-17062 Arabidopsis halleri
Araha.17461s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold17461: 16563-17062 Arabidopsis halleri
Araha.17461s0005 0.5kb downstream 0.5kb downstream 2833 true Scaffold17461: 13730-16562 Arabidopsis halleri
Araha.17461s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold17461: 13730-14229 Arabidopsis halleri
Araha.17461s0005 1.0kb upstream 1.0kb upstream 3333 true Scaffold17461: 14230-17562 Arabidopsis halleri
Araha.17461s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold17461: 16563-17562 Arabidopsis halleri
Araha.17461s0005 1.0kb downstream 1.0kb downstream 3333 true Scaffold17461: 13230-16562 Arabidopsis halleri
Araha.17461s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold17461: 13230-14229 Arabidopsis halleri
Araha.17461s0005 2.0kb upstream 2.0kb upstream 4333 true Scaffold17461: 14230-18562 Arabidopsis halleri
Araha.17461s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold17461: 16563-18562 Arabidopsis halleri
Araha.17461s0005 2.0kb downstream 2.0kb downstream 4333 true Scaffold17461: 12230-16562 Arabidopsis halleri
Araha.17461s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold17461: 12230-14229 Arabidopsis halleri
Araha.17461s0005 5.0kb upstream 5.0kb upstream 7333 true Scaffold17461: 14230-21562 Arabidopsis halleri
Araha.17461s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold17461: 16563-21562 Arabidopsis halleri
Araha.17461s0005 5.0kb downstream 5.0kb downstream 7333 true Scaffold17461: 9230-16562 Arabidopsis halleri
Araha.17461s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold17461: 9230-14229 Arabidopsis halleri
Araha.17461s0005 10.0kb upstream 10.0kb upstream 12333 true Scaffold17461: 14230-26562 Arabidopsis halleri
Araha.17461s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold17461: 16563-26562 Arabidopsis halleri
Araha.17461s0005 10.0kb downstream 10.0kb downstream 12333 true Scaffold17461: 4230-16562 Arabidopsis halleri
Araha.17461s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold17461: 4230-14229 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041417 5273 Angiosperm View MSA
122362326 5261 Brassicaceae View MSA
123840832 5264 Brassicales-Malvales View MSA
124338504 5266 SBM View MSA
124239973 5268 Malvidae View MSA
124063598 5270 Rosid View MSA
123745953 5271 Pentapetalae View MSA
122793471 5272 Eudicot View MSA
121346374 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain