Gene : Araha.17454s0007 A. halleri v1.1

Defline:  (1 of 1) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1 Genomic Order:  7
Name:  ? Araha.17454s0007 Secondary Identifier:  ? PAC:28849676

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.17454s0007 0.5kb upstream 0.5kb upstream 1989 true Scaffold17454: 29151-31139 Arabidopsis halleri
Araha.17454s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold17454: 30640-31139 Arabidopsis halleri
Araha.17454s0007 0.5kb downstream 0.5kb downstream 1989 true Scaffold17454: 28651-30639 Arabidopsis halleri
Araha.17454s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold17454: 28651-29150 Arabidopsis halleri
Araha.17454s0007 1.0kb upstream 1.0kb upstream 2489 true Scaffold17454: 29151-31639 Arabidopsis halleri
Araha.17454s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold17454: 30640-31639 Arabidopsis halleri
Araha.17454s0007 1.0kb downstream 1.0kb downstream 2489 true Scaffold17454: 28151-30639 Arabidopsis halleri
Araha.17454s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold17454: 28151-29150 Arabidopsis halleri
Araha.17454s0007 2.0kb upstream 2.0kb upstream 3489 true Scaffold17454: 29151-32639 Arabidopsis halleri
Araha.17454s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold17454: 30640-32639 Arabidopsis halleri
Araha.17454s0007 2.0kb downstream 2.0kb downstream 3489 true Scaffold17454: 27151-30639 Arabidopsis halleri
Araha.17454s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold17454: 27151-29150 Arabidopsis halleri
Araha.17454s0007 5.0kb upstream 5.0kb upstream 6489 true Scaffold17454: 29151-35639 Arabidopsis halleri
Araha.17454s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold17454: 30640-35639 Arabidopsis halleri
Araha.17454s0007 5.0kb downstream 5.0kb downstream 6489 true Scaffold17454: 24151-30639 Arabidopsis halleri
Araha.17454s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold17454: 24151-29150 Arabidopsis halleri
Araha.17454s0007 10.0kb upstream 10.0kb upstream 11489 true Scaffold17454: 29151-40639 Arabidopsis halleri
Araha.17454s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold17454: 30640-40639 Arabidopsis halleri
Araha.17454s0007 10.0kb downstream 10.0kb downstream 11489 true Scaffold17454: 19151-30639 Arabidopsis halleri
Araha.17454s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold17454: 19151-29150 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369300 5261 Brassicaceae View MSA
123827422 5264 Brassicales-Malvales View MSA
124341116 5266 SBM View MSA
124239899 5268 Malvidae View MSA
124061130 5270 Rosid View MSA
123737004 5271 Pentapetalae View MSA
122788525 5272 Eudicot View MSA
122041749 5273 Angiosperm View MSA
121344113 5274 Embryophyte View MSA
123423900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain