Gene : Araha.18479s0011 A. halleri v1.1
Defline:  (1 of 1) PTHR23245:SF35 - TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE 2 Genomic Order:  11
Name:  ? Araha.18479s0011 Secondary Identifier:  ? PAC:28839330
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6829 Arabidopsis halleri pathologic  
Ahalleri PWY-7286 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.18479s0011 0.5kb upstream 0.5kb upstream 3713 true Scaffold18479: 44963-48675 Arabidopsis halleri
Araha.18479s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold18479: 48176-48675 Arabidopsis halleri
Araha.18479s0011 0.5kb downstream 0.5kb downstream 3713 true Scaffold18479: 44463-48175 Arabidopsis halleri
Araha.18479s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold18479: 44463-44962 Arabidopsis halleri
Araha.18479s0011 1.0kb upstream 1.0kb upstream 4213 true Scaffold18479: 44963-49175 Arabidopsis halleri
Araha.18479s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold18479: 48176-49175 Arabidopsis halleri
Araha.18479s0011 1.0kb downstream 1.0kb downstream 4213 true Scaffold18479: 43963-48175 Arabidopsis halleri
Araha.18479s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold18479: 43963-44962 Arabidopsis halleri
Araha.18479s0011 2.0kb upstream 2.0kb upstream 5213 true Scaffold18479: 44963-50175 Arabidopsis halleri
Araha.18479s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold18479: 48176-50175 Arabidopsis halleri
Araha.18479s0011 2.0kb downstream 2.0kb downstream 5213 true Scaffold18479: 42963-48175 Arabidopsis halleri
Araha.18479s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold18479: 42963-44962 Arabidopsis halleri
Araha.18479s0011 5.0kb upstream 5.0kb upstream 8213 true Scaffold18479: 44963-53175 Arabidopsis halleri
Araha.18479s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold18479: 48176-53175 Arabidopsis halleri
Araha.18479s0011 5.0kb downstream 5.0kb downstream 8213 true Scaffold18479: 39963-48175 Arabidopsis halleri
Araha.18479s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold18479: 39963-44962 Arabidopsis halleri
Araha.18479s0011 10.0kb upstream 10.0kb upstream 13213 true Scaffold18479: 44963-58175 Arabidopsis halleri
Araha.18479s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold18479: 48176-58175 Arabidopsis halleri
Araha.18479s0011 10.0kb downstream 10.0kb downstream 13213 true Scaffold18479: 34963-48175 Arabidopsis halleri
Araha.18479s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold18479: 34963-44962 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372318 5261 Brassicaceae View MSA
123834818 5264 Brassicales-Malvales View MSA
124345707 5266 SBM View MSA
124243518 5268 Malvidae View MSA
124065435 5270 Rosid View MSA
123747956 5271 Pentapetalae View MSA
122788813 5272 Eudicot View MSA
122045692 5273 Angiosperm View MSA
121347346 5274 Embryophyte View MSA
123426085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain