Gene : Araha.18435s0001 A. halleri v1.1

Defline:  (1 of 391) PF13041 - PPR repeat family (PPR_2) Genomic Order:  1
Name:  ? Araha.18435s0001 Secondary Identifier:  ? PAC:28857677

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.18435s0001 0.5kb upstream 0.5kb upstream 3281 true Scaffold18435: 1013-4293 Arabidopsis halleri
Araha.18435s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold18435: 1013-1512 Arabidopsis halleri
Araha.18435s0001 0.5kb downstream 0.5kb downstream 3281 true Scaffold18435: 1513-4793 Arabidopsis halleri
Araha.18435s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold18435: 4294-4793 Arabidopsis halleri
Araha.18435s0001 1.0kb upstream 1.0kb upstream 3781 true Scaffold18435: 513-4293 Arabidopsis halleri
Araha.18435s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold18435: 513-1512 Arabidopsis halleri
Araha.18435s0001 1.0kb downstream 1.0kb downstream 3571 true Scaffold18435: 1513-5083 Arabidopsis halleri
Araha.18435s0001 1.0kb downstream 1.0kb downstream 790 false Scaffold18435: 4294-5083 Arabidopsis halleri
Araha.18435s0001 2.0kb upstream 2.0kb upstream 4293 true Scaffold18435: 1-4293 Arabidopsis halleri
Araha.18435s0001 2.0kb upstream 2.0kb upstream 1512 false Scaffold18435: 1-1512 Arabidopsis halleri
Araha.18435s0001 2.0kb downstream 2.0kb downstream 3571 true Scaffold18435: 1513-5083 Arabidopsis halleri
Araha.18435s0001 2.0kb downstream 2.0kb downstream 790 false Scaffold18435: 4294-5083 Arabidopsis halleri
Araha.18435s0001 5.0kb upstream 5.0kb upstream 4293 true Scaffold18435: 1-4293 Arabidopsis halleri
Araha.18435s0001 5.0kb upstream 5.0kb upstream 1512 false Scaffold18435: 1-1512 Arabidopsis halleri
Araha.18435s0001 5.0kb downstream 5.0kb downstream 3571 true Scaffold18435: 1513-5083 Arabidopsis halleri
Araha.18435s0001 5.0kb downstream 5.0kb downstream 790 false Scaffold18435: 4294-5083 Arabidopsis halleri
Araha.18435s0001 10.0kb upstream 10.0kb upstream 4293 true Scaffold18435: 1-4293 Arabidopsis halleri
Araha.18435s0001 10.0kb upstream 10.0kb upstream 1512 false Scaffold18435: 1-1512 Arabidopsis halleri
Araha.18435s0001 10.0kb downstream 10.0kb downstream 3571 true Scaffold18435: 1513-5083 Arabidopsis halleri
Araha.18435s0001 10.0kb downstream 10.0kb downstream 790 false Scaffold18435: 4294-5083 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373315 5261 Brassicaceae View MSA
123800530 5264 Brassicales-Malvales View MSA
124297937 5266 SBM View MSA
124149704 5268 Malvidae View MSA
123875456 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain