Gene : Araha.18528s0005 A. halleri v1.1

Defline:  (1 of 2) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Genomic Order:  5
Name:  ? Araha.18528s0005 Secondary Identifier:  ? PAC:28851120

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.18528s0005 0.5kb upstream 0.5kb upstream 2215 true Scaffold18528: 18730-20944 Arabidopsis halleri
Araha.18528s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold18528: 18730-19229 Arabidopsis halleri
Araha.18528s0005 0.5kb downstream 0.5kb downstream 2215 true Scaffold18528: 19230-21444 Arabidopsis halleri
Araha.18528s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold18528: 20945-21444 Arabidopsis halleri
Araha.18528s0005 1.0kb upstream 1.0kb upstream 2715 true Scaffold18528: 18230-20944 Arabidopsis halleri
Araha.18528s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold18528: 18230-19229 Arabidopsis halleri
Araha.18528s0005 1.0kb downstream 1.0kb downstream 2715 true Scaffold18528: 19230-21944 Arabidopsis halleri
Araha.18528s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold18528: 20945-21944 Arabidopsis halleri
Araha.18528s0005 2.0kb upstream 2.0kb upstream 3715 true Scaffold18528: 17230-20944 Arabidopsis halleri
Araha.18528s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold18528: 17230-19229 Arabidopsis halleri
Araha.18528s0005 2.0kb downstream 2.0kb downstream 3715 true Scaffold18528: 19230-22944 Arabidopsis halleri
Araha.18528s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold18528: 20945-22944 Arabidopsis halleri
Araha.18528s0005 5.0kb upstream 5.0kb upstream 6715 true Scaffold18528: 14230-20944 Arabidopsis halleri
Araha.18528s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold18528: 14230-19229 Arabidopsis halleri
Araha.18528s0005 5.0kb downstream 5.0kb downstream 6715 true Scaffold18528: 19230-25944 Arabidopsis halleri
Araha.18528s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold18528: 20945-25944 Arabidopsis halleri
Araha.18528s0005 10.0kb upstream 10.0kb upstream 11715 true Scaffold18528: 9230-20944 Arabidopsis halleri
Araha.18528s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold18528: 9230-19229 Arabidopsis halleri
Araha.18528s0005 10.0kb downstream 10.0kb downstream 11715 true Scaffold18528: 19230-30944 Arabidopsis halleri
Araha.18528s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold18528: 20945-30944 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369717 5261 Brassicaceae View MSA
123840950 5264 Brassicales-Malvales View MSA
124338914 5266 SBM View MSA
124252214 5268 Malvidae View MSA
124073525 5270 Rosid View MSA
123749217 5271 Pentapetalae View MSA
122792770 5272 Eudicot View MSA
122049779 5273 Angiosperm View MSA
121351769 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain