Protein Family : COP1-interactive protein 1 122049779

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  248

248 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30106.t000019 (1 of 1) PTHR18937//PTHR18937:SF225 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED R. communis v0.1 7584   30106: 405401-412984
30190.t000037 (1 of 1) PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED R. communis v0.1 2671   30190: 3437994-3440664
30190.t000038 (1 of 1) PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMED R. communis v0.1 5424   30190: 3443392-3448815
Cucsa.107240 (1 of 1) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED C. sativus v1.0 1505   scaffold00930: 663033-664537
Cucsa.107250 (1 of 1) PTHR13140//PTHR13140:SF418 - MYOSIN C. sativus v1.0 7681   scaffold00930: 667377-675057
Cucsa.180020 (1 of 1) KOG0964 - Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) C. sativus v1.0 5803   scaffold01233: 368792-374594
orange1.1g043740m.g (1 of 1) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED C. sinensis v1.1 2898   scaffold00009: 1352426-1355323
orange1.1g000643m.g (1 of 1) PTHR18937//PTHR18937:SF225 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER C. sinensis v1.1 8993   scaffold00036: 796875-805867
AT5G41790 (1 of 1) PTHR13140:SF433 - COP1-INTERACTIVE PROTEIN 1 A. thaliana TAIR10 CIP1 5318   Chr5: 16727530-16732847
AT5G41780 (1 of 2) PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED A. thaliana TAIR10 1759   Chr5: 16723075-16724833
AT1G05320 (1 of 13) KOG0978 - E3 ubiquitin ligase involved in syntaxin degradation A. thaliana TAIR10 4131   Chr1: 1553603-1557733
AT1G64330 (1 of 5) PTHR32258:SF4 - KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN A. thaliana TAIR10 3294   Chr1: 23870905-23874198
AT1G64320 (1 of 2) PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED A. thaliana TAIR10 1513   Chr1: 23869036-23870548
AT2G32240 (1 of 1) KOG0964//KOG0978 - Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) // E3 ubiquitin ligase involved in syntaxin degradation A. thaliana TAIR10 6857   Chr2: 13684299-13691155
Thhalv10016148m.g (1 of 1) PTHR18937//PTHR18937:SF225 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER E. salsugineum v1.0 6857   scaffold_10: 6708477-6715333
Thhalv10027620m.g (1 of 1) PTHR13140:SF433 - COP1-INTERACTIVE PROTEIN 1 E. salsugineum v1.0 4821   scaffold_14: 2346222-2351042
Thhalv10028203m.g (1 of 2) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED E. salsugineum v1.0 1675   scaffold_14: 2355068-2356742
Thhalv10006865m.g (1 of 13) KOG0978 - E3 ubiquitin ligase involved in syntaxin degradation E. salsugineum v1.0 3228   scaffold_5: 14054416-14057643
Thhalv10023387m.g (1 of 5) PTHR32258:SF4 - KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN E. salsugineum v1.0 3389   scaffold_8: 322402-325790
Thhalv10024082m.g (1 of 2) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED E. salsugineum v1.0 1915   scaffold_8: 326841-328755
Ciclev10010914m.g (1 of 1) PTHR18937//PTHR18937:SF225 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER C. clementina v1.0 7764   scaffold_6: 18395420-18403183
Ciclev10024006m.g (1 of 1) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED C. clementina v1.0 2931   scaffold_3: 1116766-1119696
Ciclev10018618m.g (1 of 1) PTHR13140//PTHR13140:SF470 - MYOSIN C. clementina v1.0 5408   scaffold_3: 1110091-1115498
Lus10032360.g (1 of 4) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED L. usitatissimum v1.0 1964   scaffold291: 915584-917547
Lus10032361.g (1 of 29) PTHR18937 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER L. usitatissimum v1.0 1981   scaffold291: 920245-922225
Lus10032362.g (1 of 4) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED L. usitatissimum v1.0 2019   scaffold291: 922246-924264
Lus10033944.g (1 of 4) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED L. usitatissimum v1.0 2057   scaffold292: 81340-83396
Lus10033945.g (1 of 4) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED L. usitatissimum v1.0 4160   scaffold292: 86361-90520
Lus10003812.g (1 of 1) KOG0018//KOG0962//KOG0964//KOG0978 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) // DNA repair protein RAD50, ABC-type ATPase/SMC superfamily // Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) // E3 ubiquitin ligase involved in syntaxin degradation L. usitatissimum v1.0 4215   scaffold654: 85662-89876
Lus10010464.g (1 of 1) KOG0964//KOG0978 - Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) // E3 ubiquitin ligase involved in syntaxin degradation L. usitatissimum v1.0 4197   scaffold910: 258763-262959

248 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30190.m010802 R. communis v0.1 122049779 COP1-interactive protein 1 3 5273 Angiosperm
30190.m010801 R. communis v0.1 122049779 COP1-interactive protein 1 3 5273 Angiosperm
Cucsa.107250.1 C. sativus v1.0 122049779 COP1-interactive protein 1 3 5273 Angiosperm
Cucsa.107240.1 C. sativus v1.0 122049779 COP1-interactive protein 1 3 5273 Angiosperm
Cucsa.180020.1 C. sativus v1.0 122049779 COP1-interactive protein 1 3 5273 Angiosperm
AT1G64320.1 A. thaliana TAIR10 122049779 COP1-interactive protein 1 6 5273 Angiosperm
AT5G41780.1 A. thaliana TAIR10 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Thhalv10027620m E. salsugineum v1.0 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Thhalv10023387m E. salsugineum v1.0 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Lus10010464 L. usitatissimum v1.0 122049779 COP1-interactive protein 1 7 5273 Angiosperm
Lus10033945 L. usitatissimum v1.0 122049779 COP1-interactive protein 1 7 5273 Angiosperm
Gorai.004G135400.1 G. raimondii v2.1 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Gorai.007G174000.1 G. raimondii v2.1 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Gorai.001G093100.1 G. raimondii v2.1 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Gorai.006G207900.1 G. raimondii v2.1 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Thecc1EG002023t4 T. cacao v1.1 122049779 COP1-interactive protein 1 3 5273 Angiosperm
Araha.5140s0002.1.p A. halleri v1.1 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Migut.A00679.1.p M. guttatus v2.0 122049779 COP1-interactive protein 1 5 5273 Angiosperm
Glyma.11G096400.1.p G. max Wm82.a2.v1 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Glyma.08G021400.1.p G. max Wm82.a2.v1 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Glyma.12G022500.1.p G. max Wm82.a2.v1 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Brara.J00356.1.p B. rapa FPsc v1.3 122049779 COP1-interactive protein 1 8 5273 Angiosperm
Brara.G01526.1.p B. rapa FPsc v1.3 122049779 COP1-interactive protein 1 8 5273 Angiosperm
Bostr.29223s0064.1.p B. stricta v1.2 122049779 COP1-interactive protein 1 6 5273 Angiosperm
Medtr8g099280.1 M. truncatula Mt4.0v1 122049779 COP1-interactive protein 1 5 5273 Angiosperm
Medtr8g099265.1 M. truncatula Mt4.0v1 122049779 COP1-interactive protein 1 5 5273 Angiosperm
Medtr8g099275.1 M. truncatula Mt4.0v1 122049779 COP1-interactive protein 1 5 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00015.64 A. trichopoda v1.0 122049779 COP1-interactive protein 1 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00032.147 A. trichopoda v1.0 122049779 COP1-interactive protein 1 2 5273 Angiosperm
Traes_3AL_0FE65F4A0.1 T. aestivum v2.2 122049779 COP1-interactive protein 1 5 5273 Angiosperm