Gene : Araha.19157s0001 A. halleri v1.1

Defline:  (1 of 3) PTHR33070:SF3 - EXPRESSED PROTEIN Genomic Order:  1
Name:  ? Araha.19157s0001 Secondary Identifier:  ? PAC:28845895

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19157s0001 0.5kb upstream 0.5kb upstream 1241 true Scaffold19157: 13-1253 Arabidopsis halleri
Araha.19157s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold19157: 754-1253 Arabidopsis halleri
Araha.19157s0001 0.5kb downstream 0.5kb downstream 753 true Scaffold19157: 1-753 Arabidopsis halleri
Araha.19157s0001 0.5kb downstream 0.5kb downstream 12 false Scaffold19157: 1-12 Arabidopsis halleri
Araha.19157s0001 1.0kb upstream 1.0kb upstream 1741 true Scaffold19157: 13-1753 Arabidopsis halleri
Araha.19157s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold19157: 754-1753 Arabidopsis halleri
Araha.19157s0001 1.0kb downstream 1.0kb downstream 753 true Scaffold19157: 1-753 Arabidopsis halleri
Araha.19157s0001 1.0kb downstream 1.0kb downstream 12 false Scaffold19157: 1-12 Arabidopsis halleri
Araha.19157s0001 2.0kb upstream 2.0kb upstream 2741 true Scaffold19157: 13-2753 Arabidopsis halleri
Araha.19157s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold19157: 754-2753 Arabidopsis halleri
Araha.19157s0001 2.0kb downstream 2.0kb downstream 753 true Scaffold19157: 1-753 Arabidopsis halleri
Araha.19157s0001 2.0kb downstream 2.0kb downstream 12 false Scaffold19157: 1-12 Arabidopsis halleri
Araha.19157s0001 5.0kb upstream 5.0kb upstream 5741 true Scaffold19157: 13-5753 Arabidopsis halleri
Araha.19157s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold19157: 754-5753 Arabidopsis halleri
Araha.19157s0001 5.0kb downstream 5.0kb downstream 753 true Scaffold19157: 1-753 Arabidopsis halleri
Araha.19157s0001 5.0kb downstream 5.0kb downstream 12 false Scaffold19157: 1-12 Arabidopsis halleri
Araha.19157s0001 10.0kb upstream 10.0kb upstream 10741 true Scaffold19157: 13-10753 Arabidopsis halleri
Araha.19157s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold19157: 754-10753 Arabidopsis halleri
Araha.19157s0001 10.0kb downstream 10.0kb downstream 753 true Scaffold19157: 1-753 Arabidopsis halleri
Araha.19157s0001 10.0kb downstream 10.0kb downstream 12 false Scaffold19157: 1-12 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366679 5261 Brassicaceae View MSA
123827513 5264 Brassicales-Malvales View MSA
124350956 5266 SBM View MSA
124248071 5268 Malvidae View MSA
124069570 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain