Gene : Araha.19287s0001 A. halleri v1.1

Defline:  (1 of 4) PTHR12663:SF3 - ASPARTYL BETA-HYDROXYLASE N-TERMINAL REGION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1
Name:  ? Araha.19287s0001 Secondary Identifier:  ? PAC:28839206

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19287s0001 0.5kb upstream 0.5kb upstream 4681 true Scaffold19287: 2521-7201 Arabidopsis halleri
Araha.19287s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold19287: 6702-7201 Arabidopsis halleri
Araha.19287s0001 0.5kb downstream 0.5kb downstream 4681 true Scaffold19287: 2021-6701 Arabidopsis halleri
Araha.19287s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold19287: 2021-2520 Arabidopsis halleri
Araha.19287s0001 1.0kb upstream 1.0kb upstream 5181 true Scaffold19287: 2521-7701 Arabidopsis halleri
Araha.19287s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold19287: 6702-7701 Arabidopsis halleri
Araha.19287s0001 1.0kb downstream 1.0kb downstream 5181 true Scaffold19287: 1521-6701 Arabidopsis halleri
Araha.19287s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold19287: 1521-2520 Arabidopsis halleri
Araha.19287s0001 2.0kb upstream 2.0kb upstream 6181 true Scaffold19287: 2521-8701 Arabidopsis halleri
Araha.19287s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold19287: 6702-8701 Arabidopsis halleri
Araha.19287s0001 2.0kb downstream 2.0kb downstream 6181 true Scaffold19287: 521-6701 Arabidopsis halleri
Araha.19287s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold19287: 521-2520 Arabidopsis halleri
Araha.19287s0001 5.0kb upstream 5.0kb upstream 9181 true Scaffold19287: 2521-11701 Arabidopsis halleri
Araha.19287s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold19287: 6702-11701 Arabidopsis halleri
Araha.19287s0001 5.0kb downstream 5.0kb downstream 6701 true Scaffold19287: 1-6701 Arabidopsis halleri
Araha.19287s0001 5.0kb downstream 5.0kb downstream 2520 false Scaffold19287: 1-2520 Arabidopsis halleri
Araha.19287s0001 10.0kb upstream 10.0kb upstream 14181 true Scaffold19287: 2521-16701 Arabidopsis halleri
Araha.19287s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold19287: 6702-16701 Arabidopsis halleri
Araha.19287s0001 10.0kb downstream 10.0kb downstream 6701 true Scaffold19287: 1-6701 Arabidopsis halleri
Araha.19287s0001 10.0kb downstream 10.0kb downstream 2520 false Scaffold19287: 1-2520 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366269 5261 Brassicaceae View MSA
123838757 5264 Brassicales-Malvales View MSA
124322495 5266 SBM View MSA
124251613 5268 Malvidae View MSA
124073544 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain