Gene : Araha.18811s0001 A. halleri v1.1
Defline:  (1 of 3) PTHR13205 - TRANSMEMBRANE PROTEIN 15-RELATED Genomic Order:  1
Name:  ? Araha.18811s0001 Secondary Identifier:  ? PAC:28850623
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6129 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.18811s0001 0.5kb upstream 0.5kb upstream 3718 true Scaffold18811: 4120-7837 Arabidopsis halleri
Araha.18811s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold18811: 7338-7837 Arabidopsis halleri
Araha.18811s0001 0.5kb downstream 0.5kb downstream 3718 true Scaffold18811: 3620-7337 Arabidopsis halleri
Araha.18811s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold18811: 3620-4119 Arabidopsis halleri
Araha.18811s0001 1.0kb upstream 1.0kb upstream 4218 true Scaffold18811: 4120-8337 Arabidopsis halleri
Araha.18811s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold18811: 7338-8337 Arabidopsis halleri
Araha.18811s0001 1.0kb downstream 1.0kb downstream 4218 true Scaffold18811: 3120-7337 Arabidopsis halleri
Araha.18811s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold18811: 3120-4119 Arabidopsis halleri
Araha.18811s0001 2.0kb upstream 2.0kb upstream 5218 true Scaffold18811: 4120-9337 Arabidopsis halleri
Araha.18811s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold18811: 7338-9337 Arabidopsis halleri
Araha.18811s0001 2.0kb downstream 2.0kb downstream 5218 true Scaffold18811: 2120-7337 Arabidopsis halleri
Araha.18811s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold18811: 2120-4119 Arabidopsis halleri
Araha.18811s0001 5.0kb upstream 5.0kb upstream 8218 true Scaffold18811: 4120-12337 Arabidopsis halleri
Araha.18811s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold18811: 7338-12337 Arabidopsis halleri
Araha.18811s0001 5.0kb downstream 5.0kb downstream 7337 true Scaffold18811: 1-7337 Arabidopsis halleri
Araha.18811s0001 5.0kb downstream 5.0kb downstream 4119 false Scaffold18811: 1-4119 Arabidopsis halleri
Araha.18811s0001 10.0kb upstream 10.0kb upstream 10609 true Scaffold18811: 4120-14728 Arabidopsis halleri
Araha.18811s0001 10.0kb upstream 10.0kb upstream 7391 false Scaffold18811: 7338-14728 Arabidopsis halleri
Araha.18811s0001 10.0kb downstream 10.0kb downstream 7337 true Scaffold18811: 1-7337 Arabidopsis halleri
Araha.18811s0001 10.0kb downstream 10.0kb downstream 4119 false Scaffold18811: 1-4119 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121485632 5273 Angiosperm Singleton cluster - no MSA
122319350 5261 Brassicaceae Singleton cluster - no MSA
123760950 5264 Brassicales-Malvales Singleton cluster - no MSA
124259585 5266 SBM Singleton cluster - no MSA
124116207 5268 Malvidae Singleton cluster - no MSA
123845599 5270 Rosid Singleton cluster - no MSA
123431880 5271 Pentapetalae Singleton cluster - no MSA
122467501 5272 Eudicot Singleton cluster - no MSA
120759026 5274 Embryophyte Singleton cluster - no MSA
122801485 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain