Gene : Araha.21812s0002 A. halleri v1.1
Defline:  (1 of 2) PTHR11851//PTHR11851:SF145 - METALLOPROTEASE Genomic Order:  2
Name:  ? Araha.21812s0002 Secondary Identifier:  ? PAC:28852728
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3781 Arabidopsis halleri pathologic  
Ahalleri PWY-7279 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.21812s0002 0.5kb upstream 0.5kb upstream 3859 true Scaffold21812: 3454-7312 Arabidopsis halleri
Araha.21812s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold21812: 6813-7312 Arabidopsis halleri
Araha.21812s0002 0.5kb downstream 0.5kb downstream 3859 true Scaffold21812: 2954-6812 Arabidopsis halleri
Araha.21812s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold21812: 2954-3453 Arabidopsis halleri
Araha.21812s0002 1.0kb upstream 1.0kb upstream 4095 true Scaffold21812: 3454-7548 Arabidopsis halleri
Araha.21812s0002 1.0kb upstream 1.0kb upstream 736 false Scaffold21812: 6813-7548 Arabidopsis halleri
Araha.21812s0002 1.0kb downstream 1.0kb downstream 4359 true Scaffold21812: 2454-6812 Arabidopsis halleri
Araha.21812s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold21812: 2454-3453 Arabidopsis halleri
Araha.21812s0002 2.0kb upstream 2.0kb upstream 4095 true Scaffold21812: 3454-7548 Arabidopsis halleri
Araha.21812s0002 2.0kb upstream 2.0kb upstream 736 false Scaffold21812: 6813-7548 Arabidopsis halleri
Araha.21812s0002 2.0kb downstream 2.0kb downstream 5359 true Scaffold21812: 1454-6812 Arabidopsis halleri
Araha.21812s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold21812: 1454-3453 Arabidopsis halleri
Araha.21812s0002 5.0kb upstream 5.0kb upstream 4095 true Scaffold21812: 3454-7548 Arabidopsis halleri
Araha.21812s0002 5.0kb upstream 5.0kb upstream 736 false Scaffold21812: 6813-7548 Arabidopsis halleri
Araha.21812s0002 5.0kb downstream 5.0kb downstream 6812 true Scaffold21812: 1-6812 Arabidopsis halleri
Araha.21812s0002 5.0kb downstream 5.0kb downstream 3453 false Scaffold21812: 1-3453 Arabidopsis halleri
Araha.21812s0002 10.0kb upstream 10.0kb upstream 4095 true Scaffold21812: 3454-7548 Arabidopsis halleri
Araha.21812s0002 10.0kb upstream 10.0kb upstream 736 false Scaffold21812: 6813-7548 Arabidopsis halleri
Araha.21812s0002 10.0kb downstream 10.0kb downstream 6812 true Scaffold21812: 1-6812 Arabidopsis halleri
Araha.21812s0002 10.0kb downstream 10.0kb downstream 3453 false Scaffold21812: 1-3453 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122375459 5261 Brassicaceae View MSA
123837486 5264 Brassicales-Malvales View MSA
124346987 5266 SBM View MSA
124244870 5268 Malvidae View MSA
124064083 5270 Rosid View MSA
123738249 5271 Pentapetalae View MSA
122789346 5272 Eudicot View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain