Gene : Araha.21283s0003 A. halleri v1.1
Defline:  (1 of 6) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  3
Name:  ? Araha.21283s0003 Secondary Identifier:  ? PAC:28857889
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5188 Arabidopsis halleri pathologic  
Ahalleri PWY-5918 Arabidopsis halleri pathologic  
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.21283s0003 0.5kb upstream 0.5kb upstream 3765 true Scaffold21283: 6344-10108 Arabidopsis halleri
Araha.21283s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold21283: 9609-10108 Arabidopsis halleri
Araha.21283s0003 0.5kb downstream 0.5kb downstream 3765 true Scaffold21283: 5844-9608 Arabidopsis halleri
Araha.21283s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold21283: 5844-6343 Arabidopsis halleri
Araha.21283s0003 1.0kb upstream 1.0kb upstream 4265 true Scaffold21283: 6344-10608 Arabidopsis halleri
Araha.21283s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold21283: 9609-10608 Arabidopsis halleri
Araha.21283s0003 1.0kb downstream 1.0kb downstream 4265 true Scaffold21283: 5344-9608 Arabidopsis halleri
Araha.21283s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold21283: 5344-6343 Arabidopsis halleri
Araha.21283s0003 2.0kb upstream 2.0kb upstream 5265 true Scaffold21283: 6344-11608 Arabidopsis halleri
Araha.21283s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold21283: 9609-11608 Arabidopsis halleri
Araha.21283s0003 2.0kb downstream 2.0kb downstream 5265 true Scaffold21283: 4344-9608 Arabidopsis halleri
Araha.21283s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold21283: 4344-6343 Arabidopsis halleri
Araha.21283s0003 5.0kb upstream 5.0kb upstream 8265 true Scaffold21283: 6344-14608 Arabidopsis halleri
Araha.21283s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold21283: 9609-14608 Arabidopsis halleri
Araha.21283s0003 5.0kb downstream 5.0kb downstream 8265 true Scaffold21283: 1344-9608 Arabidopsis halleri
Araha.21283s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold21283: 1344-6343 Arabidopsis halleri
Araha.21283s0003 10.0kb upstream 10.0kb upstream 13265 true Scaffold21283: 6344-19608 Arabidopsis halleri
Araha.21283s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold21283: 9609-19608 Arabidopsis halleri
Araha.21283s0003 10.0kb downstream 10.0kb downstream 9608 true Scaffold21283: 1-9608 Arabidopsis halleri
Araha.21283s0003 10.0kb downstream 10.0kb downstream 6343 false Scaffold21283: 1-6343 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368604 5261 Brassicaceae View MSA
123832530 5264 Brassicales-Malvales View MSA
124344288 5266 SBM View MSA
124238938 5268 Malvidae View MSA
124063360 5270 Rosid View MSA
123737264 5271 Pentapetalae View MSA
122787973 5272 Eudicot View MSA
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain