Gene : Araha.7575s0006 A. halleri v1.1
Defline:  (1 of 4) 1.2.4.4 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) / Dehydrogenase, branched chain alpha-keto acid Genomic Order:  6
Name:  ? Araha.7575s0006 Secondary Identifier:  ? PAC:28840932
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5046 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7575s0006 0.5kb upstream 0.5kb upstream 2681 true Scaffold7575: 26662-29342 Arabidopsis halleri
Araha.7575s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold7575: 26662-27161 Arabidopsis halleri
Araha.7575s0006 0.5kb downstream 0.5kb downstream 2681 true Scaffold7575: 27162-29842 Arabidopsis halleri
Araha.7575s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold7575: 29343-29842 Arabidopsis halleri
Araha.7575s0006 1.0kb upstream 1.0kb upstream 3181 true Scaffold7575: 26162-29342 Arabidopsis halleri
Araha.7575s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold7575: 26162-27161 Arabidopsis halleri
Araha.7575s0006 1.0kb downstream 1.0kb downstream 3181 true Scaffold7575: 27162-30342 Arabidopsis halleri
Araha.7575s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold7575: 29343-30342 Arabidopsis halleri
Araha.7575s0006 2.0kb upstream 2.0kb upstream 4181 true Scaffold7575: 25162-29342 Arabidopsis halleri
Araha.7575s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold7575: 25162-27161 Arabidopsis halleri
Araha.7575s0006 2.0kb downstream 2.0kb downstream 4181 true Scaffold7575: 27162-31342 Arabidopsis halleri
Araha.7575s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold7575: 29343-31342 Arabidopsis halleri
Araha.7575s0006 5.0kb upstream 5.0kb upstream 7181 true Scaffold7575: 22162-29342 Arabidopsis halleri
Araha.7575s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold7575: 22162-27161 Arabidopsis halleri
Araha.7575s0006 5.0kb downstream 5.0kb downstream 7181 true Scaffold7575: 27162-34342 Arabidopsis halleri
Araha.7575s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold7575: 29343-34342 Arabidopsis halleri
Araha.7575s0006 10.0kb upstream 10.0kb upstream 12181 true Scaffold7575: 17162-29342 Arabidopsis halleri
Araha.7575s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold7575: 17162-27161 Arabidopsis halleri
Araha.7575s0006 10.0kb downstream 10.0kb downstream 12181 true Scaffold7575: 27162-39342 Arabidopsis halleri
Araha.7575s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold7575: 29343-39342 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377784 5261 Brassicaceae View MSA
123830123 5264 Brassicales-Malvales View MSA
124341245 5266 SBM View MSA
124243640 5268 Malvidae View MSA
124067270 5270 Rosid View MSA
123743874 5271 Pentapetalae View MSA
122787684 5272 Eudicot View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain