Gene : Araha.23602s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR11815 - SUCCINYL-COA SYNTHETASE BETA CHAIN Genomic Order:  1
Name:  ? Araha.23602s0001 Secondary Identifier:  ? PAC:28841435
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri PWY-5690 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.23602s0001 0.5kb upstream 0.5kb upstream 2226 true Scaffold23602: 571-2796 Arabidopsis halleri
Araha.23602s0001 0.5kb upstream 0.5kb upstream 1 false Scaffold23602: 2796-2796 Arabidopsis halleri
Araha.23602s0001 0.5kb downstream 0.5kb downstream 2725 true Scaffold23602: 71-2795 Arabidopsis halleri
Araha.23602s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold23602: 71-570 Arabidopsis halleri
Araha.23602s0001 1.0kb upstream 1.0kb upstream 2226 true Scaffold23602: 571-2796 Arabidopsis halleri
Araha.23602s0001 1.0kb upstream 1.0kb upstream 1 false Scaffold23602: 2796-2796 Arabidopsis halleri
Araha.23602s0001 1.0kb downstream 1.0kb downstream 2795 true Scaffold23602: 1-2795 Arabidopsis halleri
Araha.23602s0001 1.0kb downstream 1.0kb downstream 570 false Scaffold23602: 1-570 Arabidopsis halleri
Araha.23602s0001 2.0kb upstream 2.0kb upstream 2226 true Scaffold23602: 571-2796 Arabidopsis halleri
Araha.23602s0001 2.0kb upstream 2.0kb upstream 1 false Scaffold23602: 2796-2796 Arabidopsis halleri
Araha.23602s0001 2.0kb downstream 2.0kb downstream 2795 true Scaffold23602: 1-2795 Arabidopsis halleri
Araha.23602s0001 2.0kb downstream 2.0kb downstream 570 false Scaffold23602: 1-570 Arabidopsis halleri
Araha.23602s0001 5.0kb upstream 5.0kb upstream 2226 true Scaffold23602: 571-2796 Arabidopsis halleri
Araha.23602s0001 5.0kb upstream 5.0kb upstream 1 false Scaffold23602: 2796-2796 Arabidopsis halleri
Araha.23602s0001 5.0kb downstream 5.0kb downstream 2795 true Scaffold23602: 1-2795 Arabidopsis halleri
Araha.23602s0001 5.0kb downstream 5.0kb downstream 570 false Scaffold23602: 1-570 Arabidopsis halleri
Araha.23602s0001 10.0kb upstream 10.0kb upstream 2226 true Scaffold23602: 571-2796 Arabidopsis halleri
Araha.23602s0001 10.0kb upstream 10.0kb upstream 1 false Scaffold23602: 2796-2796 Arabidopsis halleri
Araha.23602s0001 10.0kb downstream 10.0kb downstream 2795 true Scaffold23602: 1-2795 Arabidopsis halleri
Araha.23602s0001 10.0kb downstream 10.0kb downstream 570 false Scaffold23602: 1-570 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368823 5261 Brassicaceae View MSA
123831519 5264 Brassicales-Malvales View MSA
124339342 5266 SBM View MSA
124251399 5268 Malvidae View MSA
124060872 5270 Rosid View MSA
123742087 5271 Pentapetalae View MSA
122792279 5272 Eudicot View MSA
122051444 5273 Angiosperm View MSA
121345383 5274 Embryophyte View MSA
123424499 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain