Gene : Araha.7802s0005 A. halleri v1.1

Defline:  (1 of 1) PTHR33399:SF5 - PSBQ-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  5
Name:  ? Araha.7802s0005 Secondary Identifier:  ? PAC:28849024

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7802s0005 0.5kb upstream 0.5kb upstream 1635 true Scaffold7802: 8430-10064 Arabidopsis halleri
Araha.7802s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold7802: 8430-8929 Arabidopsis halleri
Araha.7802s0005 0.5kb downstream 0.5kb downstream 1635 true Scaffold7802: 8930-10564 Arabidopsis halleri
Araha.7802s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold7802: 10065-10564 Arabidopsis halleri
Araha.7802s0005 1.0kb upstream 1.0kb upstream 2135 true Scaffold7802: 7930-10064 Arabidopsis halleri
Araha.7802s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold7802: 7930-8929 Arabidopsis halleri
Araha.7802s0005 1.0kb downstream 1.0kb downstream 2135 true Scaffold7802: 8930-11064 Arabidopsis halleri
Araha.7802s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold7802: 10065-11064 Arabidopsis halleri
Araha.7802s0005 2.0kb upstream 2.0kb upstream 3135 true Scaffold7802: 6930-10064 Arabidopsis halleri
Araha.7802s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold7802: 6930-8929 Arabidopsis halleri
Araha.7802s0005 2.0kb downstream 2.0kb downstream 3135 true Scaffold7802: 8930-12064 Arabidopsis halleri
Araha.7802s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold7802: 10065-12064 Arabidopsis halleri
Araha.7802s0005 5.0kb upstream 5.0kb upstream 6135 true Scaffold7802: 3930-10064 Arabidopsis halleri
Araha.7802s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold7802: 3930-8929 Arabidopsis halleri
Araha.7802s0005 5.0kb downstream 5.0kb downstream 6135 true Scaffold7802: 8930-15064 Arabidopsis halleri
Araha.7802s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold7802: 10065-15064 Arabidopsis halleri
Araha.7802s0005 10.0kb upstream 10.0kb upstream 10064 true Scaffold7802: 1-10064 Arabidopsis halleri
Araha.7802s0005 10.0kb upstream 10.0kb upstream 8929 false Scaffold7802: 1-8929 Arabidopsis halleri
Araha.7802s0005 10.0kb downstream 10.0kb downstream 11135 true Scaffold7802: 8930-20064 Arabidopsis halleri
Araha.7802s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold7802: 10065-20064 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361044 5261 Brassicaceae View MSA
123841629 5264 Brassicales-Malvales View MSA
124351392 5266 SBM View MSA
124240408 5268 Malvidae View MSA
124061087 5270 Rosid View MSA
123739021 5271 Pentapetalae View MSA
122786264 5272 Eudicot View MSA
122043406 5273 Angiosperm View MSA
121310117 5274 Embryophyte View MSA
123347693 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain