Gene : Araha.8439s0003 A. halleri v1.1

Defline:  (1 of 4) PTHR31415:SF2 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Genomic Order:  3
Name:  ? Araha.8439s0003 Secondary Identifier:  ? PAC:28853892

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8439s0003 0.5kb upstream 0.5kb upstream 1127 true Scaffold8439: 11277-12403 Arabidopsis halleri
Araha.8439s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold8439: 11904-12403 Arabidopsis halleri
Araha.8439s0003 0.5kb downstream 0.5kb downstream 1127 true Scaffold8439: 10777-11903 Arabidopsis halleri
Araha.8439s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold8439: 10777-11276 Arabidopsis halleri
Araha.8439s0003 1.0kb upstream 1.0kb upstream 1627 true Scaffold8439: 11277-12903 Arabidopsis halleri
Araha.8439s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold8439: 11904-12903 Arabidopsis halleri
Araha.8439s0003 1.0kb downstream 1.0kb downstream 1627 true Scaffold8439: 10277-11903 Arabidopsis halleri
Araha.8439s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold8439: 10277-11276 Arabidopsis halleri
Araha.8439s0003 2.0kb upstream 2.0kb upstream 2627 true Scaffold8439: 11277-13903 Arabidopsis halleri
Araha.8439s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold8439: 11904-13903 Arabidopsis halleri
Araha.8439s0003 2.0kb downstream 2.0kb downstream 2627 true Scaffold8439: 9277-11903 Arabidopsis halleri
Araha.8439s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold8439: 9277-11276 Arabidopsis halleri
Araha.8439s0003 5.0kb upstream 5.0kb upstream 5627 true Scaffold8439: 11277-16903 Arabidopsis halleri
Araha.8439s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold8439: 11904-16903 Arabidopsis halleri
Araha.8439s0003 5.0kb downstream 5.0kb downstream 5627 true Scaffold8439: 6277-11903 Arabidopsis halleri
Araha.8439s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold8439: 6277-11276 Arabidopsis halleri
Araha.8439s0003 10.0kb upstream 10.0kb upstream 10627 true Scaffold8439: 11277-21903 Arabidopsis halleri
Araha.8439s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold8439: 11904-21903 Arabidopsis halleri
Araha.8439s0003 10.0kb downstream 10.0kb downstream 10627 true Scaffold8439: 1277-11903 Arabidopsis halleri
Araha.8439s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold8439: 1277-11276 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362656 5261 Brassicaceae View MSA
123840054 5264 Brassicales-Malvales View MSA
124338455 5266 SBM View MSA
124238163 5268 Malvidae View MSA
124060633 5270 Rosid View MSA
123748303 5271 Pentapetalae View MSA
122796873 5272 Eudicot View MSA
122050146 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain