Gene : Araha.25971s0005 A. halleri v1.1
Defline:  (1 of 2) 6.1.1.15//6.1.1.17 - Proline--tRNA ligase / Prolyl-tRNA synthetase // Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  5
Name:  ? Araha.25971s0005 Secondary Identifier:  ? PAC:28859272
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5188 Arabidopsis halleri pathologic  
Ahalleri PWY-5918 Arabidopsis halleri pathologic  
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.25971s0005 0.5kb upstream 0.5kb upstream 2417 true Scaffold25971: 13767-16183 Arabidopsis halleri
Araha.25971s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold25971: 13767-14266 Arabidopsis halleri
Araha.25971s0005 0.5kb downstream 0.5kb downstream 1937 true Scaffold25971: 14267-16203 Arabidopsis halleri
Araha.25971s0005 0.5kb downstream 0.5kb downstream 20 false Scaffold25971: 16184-16203 Arabidopsis halleri
Araha.25971s0005 1.0kb upstream 1.0kb upstream 2917 true Scaffold25971: 13267-16183 Arabidopsis halleri
Araha.25971s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold25971: 13267-14266 Arabidopsis halleri
Araha.25971s0005 1.0kb downstream 1.0kb downstream 1937 true Scaffold25971: 14267-16203 Arabidopsis halleri
Araha.25971s0005 1.0kb downstream 1.0kb downstream 20 false Scaffold25971: 16184-16203 Arabidopsis halleri
Araha.25971s0005 2.0kb upstream 2.0kb upstream 3917 true Scaffold25971: 12267-16183 Arabidopsis halleri
Araha.25971s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold25971: 12267-14266 Arabidopsis halleri
Araha.25971s0005 2.0kb downstream 2.0kb downstream 1937 true Scaffold25971: 14267-16203 Arabidopsis halleri
Araha.25971s0005 2.0kb downstream 2.0kb downstream 20 false Scaffold25971: 16184-16203 Arabidopsis halleri
Araha.25971s0005 5.0kb upstream 5.0kb upstream 6917 true Scaffold25971: 9267-16183 Arabidopsis halleri
Araha.25971s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold25971: 9267-14266 Arabidopsis halleri
Araha.25971s0005 5.0kb downstream 5.0kb downstream 1937 true Scaffold25971: 14267-16203 Arabidopsis halleri
Araha.25971s0005 5.0kb downstream 5.0kb downstream 20 false Scaffold25971: 16184-16203 Arabidopsis halleri
Araha.25971s0005 10.0kb upstream 10.0kb upstream 11917 true Scaffold25971: 4267-16183 Arabidopsis halleri
Araha.25971s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold25971: 4267-14266 Arabidopsis halleri
Araha.25971s0005 10.0kb downstream 10.0kb downstream 1937 true Scaffold25971: 14267-16203 Arabidopsis halleri
Araha.25971s0005 10.0kb downstream 10.0kb downstream 20 false Scaffold25971: 16184-16203 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365316 5261 Brassicaceae View MSA
123831041 5264 Brassicales-Malvales View MSA
124348511 5266 SBM View MSA
124247467 5268 Malvidae View MSA
124064223 5270 Rosid View MSA
123739091 5271 Pentapetalae View MSA
122787738 5272 Eudicot View MSA
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain