Gene : Araha.8629s0002 A. halleri v1.1

Defline:  (1 of 2) 2.3.1.39 - [Acyl-carrier-protein] S-malonyltransferase / MCAT Genomic Order:  2
Name:  ? Araha.8629s0002 Secondary Identifier:  ? PAC:28844166

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-4381 Arabidopsis halleri pathologic  
Ahalleri PWY-5156 Arabidopsis halleri pathologic  
Ahalleri PWY-7388 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8629s0002 0.5kb upstream 0.5kb upstream 3033 true Scaffold8629: 4742-7774 Arabidopsis halleri
Araha.8629s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold8629: 4742-5241 Arabidopsis halleri
Araha.8629s0002 0.5kb downstream 0.5kb downstream 3033 true Scaffold8629: 5242-8274 Arabidopsis halleri
Araha.8629s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold8629: 7775-8274 Arabidopsis halleri
Araha.8629s0002 1.0kb upstream 1.0kb upstream 3533 true Scaffold8629: 4242-7774 Arabidopsis halleri
Araha.8629s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold8629: 4242-5241 Arabidopsis halleri
Araha.8629s0002 1.0kb downstream 1.0kb downstream 3533 true Scaffold8629: 5242-8774 Arabidopsis halleri
Araha.8629s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold8629: 7775-8774 Arabidopsis halleri
Araha.8629s0002 2.0kb upstream 2.0kb upstream 4533 true Scaffold8629: 3242-7774 Arabidopsis halleri
Araha.8629s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold8629: 3242-5241 Arabidopsis halleri
Araha.8629s0002 2.0kb downstream 2.0kb downstream 4533 true Scaffold8629: 5242-9774 Arabidopsis halleri
Araha.8629s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold8629: 7775-9774 Arabidopsis halleri
Araha.8629s0002 5.0kb upstream 5.0kb upstream 7533 true Scaffold8629: 242-7774 Arabidopsis halleri
Araha.8629s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold8629: 242-5241 Arabidopsis halleri
Araha.8629s0002 5.0kb downstream 5.0kb downstream 7533 true Scaffold8629: 5242-12774 Arabidopsis halleri
Araha.8629s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold8629: 7775-12774 Arabidopsis halleri
Araha.8629s0002 10.0kb upstream 10.0kb upstream 7774 true Scaffold8629: 1-7774 Arabidopsis halleri
Araha.8629s0002 10.0kb upstream 10.0kb upstream 5241 false Scaffold8629: 1-5241 Arabidopsis halleri
Araha.8629s0002 10.0kb downstream 10.0kb downstream 8293 true Scaffold8629: 5242-13534 Arabidopsis halleri
Araha.8629s0002 10.0kb downstream 10.0kb downstream 5760 false Scaffold8629: 7775-13534 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041321 5273 Angiosperm View MSA
122365760 5261 Brassicaceae View MSA
123829753 5264 Brassicales-Malvales View MSA
124345768 5266 SBM View MSA
124241269 5268 Malvidae View MSA
124063933 5270 Rosid View MSA
123737538 5271 Pentapetalae View MSA
122786966 5272 Eudicot View MSA
121346030 5274 Embryophyte View MSA
123426767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain