Gene : Araha.8614s0002 A. halleri v1.1

Defline:  (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 Genomic Order:  2
Name:  ? Araha.8614s0002 Secondary Identifier:  ? PAC:28851737

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8614s0002 0.5kb upstream 0.5kb upstream 6155 true Scaffold8614: 2746-8900 Arabidopsis halleri
Araha.8614s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold8614: 2746-3245 Arabidopsis halleri
Araha.8614s0002 0.5kb downstream 0.5kb downstream 6155 true Scaffold8614: 3246-9400 Arabidopsis halleri
Araha.8614s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold8614: 8901-9400 Arabidopsis halleri
Araha.8614s0002 1.0kb upstream 1.0kb upstream 6655 true Scaffold8614: 2246-8900 Arabidopsis halleri
Araha.8614s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold8614: 2246-3245 Arabidopsis halleri
Araha.8614s0002 1.0kb downstream 1.0kb downstream 6655 true Scaffold8614: 3246-9900 Arabidopsis halleri
Araha.8614s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold8614: 8901-9900 Arabidopsis halleri
Araha.8614s0002 2.0kb upstream 2.0kb upstream 7655 true Scaffold8614: 1246-8900 Arabidopsis halleri
Araha.8614s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold8614: 1246-3245 Arabidopsis halleri
Araha.8614s0002 2.0kb downstream 2.0kb downstream 7655 true Scaffold8614: 3246-10900 Arabidopsis halleri
Araha.8614s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold8614: 8901-10900 Arabidopsis halleri
Araha.8614s0002 5.0kb upstream 5.0kb upstream 8900 true Scaffold8614: 1-8900 Arabidopsis halleri
Araha.8614s0002 5.0kb upstream 5.0kb upstream 3245 false Scaffold8614: 1-3245 Arabidopsis halleri
Araha.8614s0002 5.0kb downstream 5.0kb downstream 10655 true Scaffold8614: 3246-13900 Arabidopsis halleri
Araha.8614s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold8614: 8901-13900 Arabidopsis halleri
Araha.8614s0002 10.0kb upstream 10.0kb upstream 8900 true Scaffold8614: 1-8900 Arabidopsis halleri
Araha.8614s0002 10.0kb upstream 10.0kb upstream 3245 false Scaffold8614: 1-3245 Arabidopsis halleri
Araha.8614s0002 10.0kb downstream 10.0kb downstream 15655 true Scaffold8614: 3246-18900 Arabidopsis halleri
Araha.8614s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold8614: 8901-18900 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371497 5261 Brassicaceae View MSA
123834373 5264 Brassicales-Malvales View MSA
124350738 5266 SBM View MSA
124252693 5268 Malvidae View MSA
124066259 5270 Rosid View MSA
123748643 5271 Pentapetalae View MSA
122787045 5272 Eudicot View MSA
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain