Gene : Araha.8526s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR13697:SF33 - 6-PHOSPHOFRUCTOKINASE 4, CHLOROPLASTIC Genomic Order:  1
Name:  ? Araha.8526s0001 Secondary Identifier:  ? PAC:28839075
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ANAEROFRUCAT-PWY Arabidopsis halleri pathologic  
Ahalleri ANAGLYCOLYSIS-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-1042 Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8526s0001 0.5kb upstream 0.5kb upstream 3259 true Scaffold8526: 1-3259 Arabidopsis halleri
Araha.8526s0001 0.5kb upstream 0.5kb upstream 265 false Scaffold8526: 1-265 Arabidopsis halleri
Araha.8526s0001 0.5kb downstream 0.5kb downstream 3494 true Scaffold8526: 266-3759 Arabidopsis halleri
Araha.8526s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold8526: 3260-3759 Arabidopsis halleri
Araha.8526s0001 1.0kb upstream 1.0kb upstream 3259 true Scaffold8526: 1-3259 Arabidopsis halleri
Araha.8526s0001 1.0kb upstream 1.0kb upstream 265 false Scaffold8526: 1-265 Arabidopsis halleri
Araha.8526s0001 1.0kb downstream 1.0kb downstream 3994 true Scaffold8526: 266-4259 Arabidopsis halleri
Araha.8526s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold8526: 3260-4259 Arabidopsis halleri
Araha.8526s0001 2.0kb upstream 2.0kb upstream 3259 true Scaffold8526: 1-3259 Arabidopsis halleri
Araha.8526s0001 2.0kb upstream 2.0kb upstream 265 false Scaffold8526: 1-265 Arabidopsis halleri
Araha.8526s0001 2.0kb downstream 2.0kb downstream 4994 true Scaffold8526: 266-5259 Arabidopsis halleri
Araha.8526s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold8526: 3260-5259 Arabidopsis halleri
Araha.8526s0001 5.0kb upstream 5.0kb upstream 3259 true Scaffold8526: 1-3259 Arabidopsis halleri
Araha.8526s0001 5.0kb upstream 5.0kb upstream 265 false Scaffold8526: 1-265 Arabidopsis halleri
Araha.8526s0001 5.0kb downstream 5.0kb downstream 7994 true Scaffold8526: 266-8259 Arabidopsis halleri
Araha.8526s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold8526: 3260-8259 Arabidopsis halleri
Araha.8526s0001 10.0kb upstream 10.0kb upstream 3259 true Scaffold8526: 1-3259 Arabidopsis halleri
Araha.8526s0001 10.0kb upstream 10.0kb upstream 265 false Scaffold8526: 1-265 Arabidopsis halleri
Araha.8526s0001 10.0kb downstream 10.0kb downstream 12994 true Scaffold8526: 266-13259 Arabidopsis halleri
Araha.8526s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold8526: 3260-13259 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370968 5261 Brassicaceae View MSA
123827709 5264 Brassicales-Malvales View MSA
124346547 5266 SBM View MSA
124240678 5268 Malvidae View MSA
124067240 5270 Rosid View MSA
123738988 5271 Pentapetalae View MSA
122769940 5272 Eudicot View MSA
122042097 5273 Angiosperm View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain