Gene : Araha.28579s0002 A. halleri v1.1

Defline:  (1 of 2) PTHR10694//PTHR10694:SF54 - JUMONJI DOMAIN CONTAINING PROTEIN Genomic Order:  2
Name:  ? Araha.28579s0002 Secondary Identifier:  ? PAC:28857570

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.28579s0002 0.5kb upstream 0.5kb upstream 5018 true Scaffold28579: 1088-6105 Arabidopsis halleri
Araha.28579s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold28579: 1088-1587 Arabidopsis halleri
Araha.28579s0002 0.5kb downstream 0.5kb downstream 5018 true Scaffold28579: 1588-6605 Arabidopsis halleri
Araha.28579s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold28579: 6106-6605 Arabidopsis halleri
Araha.28579s0002 1.0kb upstream 1.0kb upstream 5518 true Scaffold28579: 588-6105 Arabidopsis halleri
Araha.28579s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold28579: 588-1587 Arabidopsis halleri
Araha.28579s0002 1.0kb downstream 1.0kb downstream 5518 true Scaffold28579: 1588-7105 Arabidopsis halleri
Araha.28579s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold28579: 6106-7105 Arabidopsis halleri
Araha.28579s0002 2.0kb upstream 2.0kb upstream 6105 true Scaffold28579: 1-6105 Arabidopsis halleri
Araha.28579s0002 2.0kb upstream 2.0kb upstream 1587 false Scaffold28579: 1-1587 Arabidopsis halleri
Araha.28579s0002 2.0kb downstream 2.0kb downstream 6518 true Scaffold28579: 1588-8105 Arabidopsis halleri
Araha.28579s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold28579: 6106-8105 Arabidopsis halleri
Araha.28579s0002 5.0kb upstream 5.0kb upstream 6105 true Scaffold28579: 1-6105 Arabidopsis halleri
Araha.28579s0002 5.0kb upstream 5.0kb upstream 1587 false Scaffold28579: 1-1587 Arabidopsis halleri
Araha.28579s0002 5.0kb downstream 5.0kb downstream 9518 true Scaffold28579: 1588-11105 Arabidopsis halleri
Araha.28579s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold28579: 6106-11105 Arabidopsis halleri
Araha.28579s0002 10.0kb upstream 10.0kb upstream 6105 true Scaffold28579: 1-6105 Arabidopsis halleri
Araha.28579s0002 10.0kb upstream 10.0kb upstream 1587 false Scaffold28579: 1-1587 Arabidopsis halleri
Araha.28579s0002 10.0kb downstream 10.0kb downstream 10963 true Scaffold28579: 1588-12550 Arabidopsis halleri
Araha.28579s0002 10.0kb downstream 10.0kb downstream 6445 false Scaffold28579: 6106-12550 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362963 5261 Brassicaceae View MSA
123832649 5264 Brassicales-Malvales View MSA
124348999 5266 SBM View MSA
124244079 5268 Malvidae View MSA
124069719 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain