Gene : Araha.9214s0003 A. halleri v1.1
Defline:  (1 of 1) PTHR24322:SF301 - XANTHOXIN DEHYDROGENASE Genomic Order:  3
Name:  ? Araha.9214s0003 Secondary Identifier:  ? PAC:28852085
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-695 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9214s0003 0.5kb upstream 0.5kb upstream 2076 true Scaffold9214: 4470-6545 Arabidopsis halleri
Araha.9214s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold9214: 6046-6545 Arabidopsis halleri
Araha.9214s0003 0.5kb downstream 0.5kb downstream 2076 true Scaffold9214: 3970-6045 Arabidopsis halleri
Araha.9214s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold9214: 3970-4469 Arabidopsis halleri
Araha.9214s0003 1.0kb upstream 1.0kb upstream 2420 true Scaffold9214: 4470-6889 Arabidopsis halleri
Araha.9214s0003 1.0kb upstream 1.0kb upstream 844 false Scaffold9214: 6046-6889 Arabidopsis halleri
Araha.9214s0003 1.0kb downstream 1.0kb downstream 2576 true Scaffold9214: 3470-6045 Arabidopsis halleri
Araha.9214s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold9214: 3470-4469 Arabidopsis halleri
Araha.9214s0003 2.0kb upstream 2.0kb upstream 2420 true Scaffold9214: 4470-6889 Arabidopsis halleri
Araha.9214s0003 2.0kb upstream 2.0kb upstream 844 false Scaffold9214: 6046-6889 Arabidopsis halleri
Araha.9214s0003 2.0kb downstream 2.0kb downstream 3576 true Scaffold9214: 2470-6045 Arabidopsis halleri
Araha.9214s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold9214: 2470-4469 Arabidopsis halleri
Araha.9214s0003 5.0kb upstream 5.0kb upstream 2420 true Scaffold9214: 4470-6889 Arabidopsis halleri
Araha.9214s0003 5.0kb upstream 5.0kb upstream 844 false Scaffold9214: 6046-6889 Arabidopsis halleri
Araha.9214s0003 5.0kb downstream 5.0kb downstream 6045 true Scaffold9214: 1-6045 Arabidopsis halleri
Araha.9214s0003 5.0kb downstream 5.0kb downstream 4469 false Scaffold9214: 1-4469 Arabidopsis halleri
Araha.9214s0003 10.0kb upstream 10.0kb upstream 2420 true Scaffold9214: 4470-6889 Arabidopsis halleri
Araha.9214s0003 10.0kb upstream 10.0kb upstream 844 false Scaffold9214: 6046-6889 Arabidopsis halleri
Araha.9214s0003 10.0kb downstream 10.0kb downstream 6045 true Scaffold9214: 1-6045 Arabidopsis halleri
Araha.9214s0003 10.0kb downstream 10.0kb downstream 4469 false Scaffold9214: 1-4469 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360385 5261 Brassicaceae View MSA
123830530 5264 Brassicales-Malvales View MSA
124345576 5266 SBM View MSA
124250554 5268 Malvidae View MSA
124070335 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain