Gene : Araha.30022s0005 A. halleri v1.1
Defline:  (1 of 5) 2.5.1.16 - Spermidine synthase / Putrescine aminopropyltransferase Genomic Order:  5
Name:  ? Araha.30022s0005 Secondary Identifier:  ? PAC:28852541
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri BSUBPOLYAMSYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-7528 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.30022s0005 0.5kb upstream 0.5kb upstream 3159 true Scaffold30022: 6690-9848 Arabidopsis halleri
Araha.30022s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold30022: 9349-9848 Arabidopsis halleri
Araha.30022s0005 0.5kb downstream 0.5kb downstream 3159 true Scaffold30022: 6190-9348 Arabidopsis halleri
Araha.30022s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold30022: 6190-6689 Arabidopsis halleri
Araha.30022s0005 1.0kb upstream 1.0kb upstream 3659 true Scaffold30022: 6690-10348 Arabidopsis halleri
Araha.30022s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold30022: 9349-10348 Arabidopsis halleri
Araha.30022s0005 1.0kb downstream 1.0kb downstream 3659 true Scaffold30022: 5690-9348 Arabidopsis halleri
Araha.30022s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold30022: 5690-6689 Arabidopsis halleri
Araha.30022s0005 2.0kb upstream 2.0kb upstream 4659 true Scaffold30022: 6690-11348 Arabidopsis halleri
Araha.30022s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold30022: 9349-11348 Arabidopsis halleri
Araha.30022s0005 2.0kb downstream 2.0kb downstream 4659 true Scaffold30022: 4690-9348 Arabidopsis halleri
Araha.30022s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold30022: 4690-6689 Arabidopsis halleri
Araha.30022s0005 5.0kb upstream 5.0kb upstream 7659 true Scaffold30022: 6690-14348 Arabidopsis halleri
Araha.30022s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold30022: 9349-14348 Arabidopsis halleri
Araha.30022s0005 5.0kb downstream 5.0kb downstream 7659 true Scaffold30022: 1690-9348 Arabidopsis halleri
Araha.30022s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold30022: 1690-6689 Arabidopsis halleri
Araha.30022s0005 10.0kb upstream 10.0kb upstream 12659 true Scaffold30022: 6690-19348 Arabidopsis halleri
Araha.30022s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold30022: 9349-19348 Arabidopsis halleri
Araha.30022s0005 10.0kb downstream 10.0kb downstream 9348 true Scaffold30022: 1-9348 Arabidopsis halleri
Araha.30022s0005 10.0kb downstream 10.0kb downstream 6689 false Scaffold30022: 1-6689 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374349 5261 Brassicaceae View MSA
123837275 5264 Brassicales-Malvales View MSA
124342552 5266 SBM View MSA
124246037 5268 Malvidae View MSA
124061949 5270 Rosid View MSA
123741827 5271 Pentapetalae View MSA
122790008 5272 Eudicot View MSA
122043696 5273 Angiosperm View MSA
121346443 5274 Embryophyte View MSA
123424303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain