Gene : Araha.9877s0006 A. halleri v1.1
Defline:  (1 of 2) 2.4.1.25 - 4-alpha-glucanotransferase / Oligo-1,4-1,4-glucantransferase Genomic Order:  6
Name:  ? Araha.9877s0006 Secondary Identifier:  ? PAC:28846327
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6724 Arabidopsis halleri pathologic  
Ahalleri PWY-7238 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9877s0006 0.5kb upstream 0.5kb upstream 6611 true Scaffold9877: 20858-27468 Arabidopsis halleri
Araha.9877s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold9877: 20858-21357 Arabidopsis halleri
Araha.9877s0006 0.5kb downstream 0.5kb downstream 6611 true Scaffold9877: 21358-27968 Arabidopsis halleri
Araha.9877s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold9877: 27469-27968 Arabidopsis halleri
Araha.9877s0006 1.0kb upstream 1.0kb upstream 7111 true Scaffold9877: 20358-27468 Arabidopsis halleri
Araha.9877s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold9877: 20358-21357 Arabidopsis halleri
Araha.9877s0006 1.0kb downstream 1.0kb downstream 7111 true Scaffold9877: 21358-28468 Arabidopsis halleri
Araha.9877s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold9877: 27469-28468 Arabidopsis halleri
Araha.9877s0006 2.0kb upstream 2.0kb upstream 8111 true Scaffold9877: 19358-27468 Arabidopsis halleri
Araha.9877s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold9877: 19358-21357 Arabidopsis halleri
Araha.9877s0006 2.0kb downstream 2.0kb downstream 8111 true Scaffold9877: 21358-29468 Arabidopsis halleri
Araha.9877s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold9877: 27469-29468 Arabidopsis halleri
Araha.9877s0006 5.0kb upstream 5.0kb upstream 11111 true Scaffold9877: 16358-27468 Arabidopsis halleri
Araha.9877s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold9877: 16358-21357 Arabidopsis halleri
Araha.9877s0006 5.0kb downstream 5.0kb downstream 11111 true Scaffold9877: 21358-32468 Arabidopsis halleri
Araha.9877s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold9877: 27469-32468 Arabidopsis halleri
Araha.9877s0006 10.0kb upstream 10.0kb upstream 16111 true Scaffold9877: 11358-27468 Arabidopsis halleri
Araha.9877s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold9877: 11358-21357 Arabidopsis halleri
Araha.9877s0006 10.0kb downstream 10.0kb downstream 12999 true Scaffold9877: 21358-34356 Arabidopsis halleri
Araha.9877s0006 10.0kb downstream 10.0kb downstream 6888 false Scaffold9877: 27469-34356 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366274 5261 Brassicaceae View MSA
123830069 5264 Brassicales-Malvales View MSA
124346041 5266 SBM View MSA
124239794 5268 Malvidae View MSA
124066396 5270 Rosid View MSA
123736584 5271 Pentapetalae View MSA
122793491 5272 Eudicot View MSA
122045486 5273 Angiosperm View MSA
121345018 5274 Embryophyte View MSA
123425111 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain