Gene : Araha.34442s0001 A. halleri v1.1

Defline:  (1 of 4) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT Genomic Order:  1
Name:  ? Araha.34442s0001 Secondary Identifier:  ? PAC:28848084

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.34442s0001 0.5kb upstream 0.5kb upstream 1919 true Scaffold34442: 1-1919 Arabidopsis halleri
Araha.34442s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold34442: 1-2 Arabidopsis halleri
Araha.34442s0001 0.5kb downstream 0.5kb downstream 2417 true Scaffold34442: 3-2419 Arabidopsis halleri
Araha.34442s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold34442: 1920-2419 Arabidopsis halleri
Araha.34442s0001 1.0kb upstream 1.0kb upstream 1919 true Scaffold34442: 1-1919 Arabidopsis halleri
Araha.34442s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold34442: 1-2 Arabidopsis halleri
Araha.34442s0001 1.0kb downstream 1.0kb downstream 2917 true Scaffold34442: 3-2919 Arabidopsis halleri
Araha.34442s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold34442: 1920-2919 Arabidopsis halleri
Araha.34442s0001 2.0kb upstream 2.0kb upstream 1919 true Scaffold34442: 1-1919 Arabidopsis halleri
Araha.34442s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold34442: 1-2 Arabidopsis halleri
Araha.34442s0001 2.0kb downstream 2.0kb downstream 3917 true Scaffold34442: 3-3919 Arabidopsis halleri
Araha.34442s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold34442: 1920-3919 Arabidopsis halleri
Araha.34442s0001 5.0kb upstream 5.0kb upstream 1919 true Scaffold34442: 1-1919 Arabidopsis halleri
Araha.34442s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold34442: 1-2 Arabidopsis halleri
Araha.34442s0001 5.0kb downstream 5.0kb downstream 6917 true Scaffold34442: 3-6919 Arabidopsis halleri
Araha.34442s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold34442: 1920-6919 Arabidopsis halleri
Araha.34442s0001 10.0kb upstream 10.0kb upstream 1919 true Scaffold34442: 1-1919 Arabidopsis halleri
Araha.34442s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold34442: 1-2 Arabidopsis halleri
Araha.34442s0001 10.0kb downstream 10.0kb downstream 9524 true Scaffold34442: 3-9526 Arabidopsis halleri
Araha.34442s0001 10.0kb downstream 10.0kb downstream 7607 false Scaffold34442: 1920-9526 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493038 5273 Angiosperm View MSA
122328141 5261 Brassicaceae View MSA
123769521 5264 Brassicales-Malvales View MSA
124268080 5266 SBM View MSA
124124339 5268 Malvidae View MSA
123853391 5270 Rosid View MSA
123439478 5271 Pentapetalae View MSA
122475073 5272 Eudicot View MSA
120766414 5274 Embryophyte View MSA
122808821 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain