Gene : Araha.9920s0006 A. halleri v1.1

Defline:  (1 of 1) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 Genomic Order:  6
Name:  ? Araha.9920s0006 Secondary Identifier:  ? PAC:28858862

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9920s0006 0.5kb upstream 0.5kb upstream 1106 true Scaffold9920: 25369-26474 Arabidopsis halleri
Araha.9920s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold9920: 25975-26474 Arabidopsis halleri
Araha.9920s0006 0.5kb downstream 0.5kb downstream 1106 true Scaffold9920: 24869-25974 Arabidopsis halleri
Araha.9920s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold9920: 24869-25368 Arabidopsis halleri
Araha.9920s0006 1.0kb upstream 1.0kb upstream 1280 true Scaffold9920: 25369-26648 Arabidopsis halleri
Araha.9920s0006 1.0kb upstream 1.0kb upstream 674 false Scaffold9920: 25975-26648 Arabidopsis halleri
Araha.9920s0006 1.0kb downstream 1.0kb downstream 1606 true Scaffold9920: 24369-25974 Arabidopsis halleri
Araha.9920s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold9920: 24369-25368 Arabidopsis halleri
Araha.9920s0006 2.0kb upstream 2.0kb upstream 1280 true Scaffold9920: 25369-26648 Arabidopsis halleri
Araha.9920s0006 2.0kb upstream 2.0kb upstream 674 false Scaffold9920: 25975-26648 Arabidopsis halleri
Araha.9920s0006 2.0kb downstream 2.0kb downstream 2606 true Scaffold9920: 23369-25974 Arabidopsis halleri
Araha.9920s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold9920: 23369-25368 Arabidopsis halleri
Araha.9920s0006 5.0kb upstream 5.0kb upstream 1280 true Scaffold9920: 25369-26648 Arabidopsis halleri
Araha.9920s0006 5.0kb upstream 5.0kb upstream 674 false Scaffold9920: 25975-26648 Arabidopsis halleri
Araha.9920s0006 5.0kb downstream 5.0kb downstream 5606 true Scaffold9920: 20369-25974 Arabidopsis halleri
Araha.9920s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold9920: 20369-25368 Arabidopsis halleri
Araha.9920s0006 10.0kb upstream 10.0kb upstream 1280 true Scaffold9920: 25369-26648 Arabidopsis halleri
Araha.9920s0006 10.0kb upstream 10.0kb upstream 674 false Scaffold9920: 25975-26648 Arabidopsis halleri
Araha.9920s0006 10.0kb downstream 10.0kb downstream 10606 true Scaffold9920: 15369-25974 Arabidopsis halleri
Araha.9920s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold9920: 15369-25368 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368956 5261 Brassicaceae View MSA
123836089 5264 Brassicales-Malvales View MSA
124348843 5266 SBM View MSA
124248046 5268 Malvidae View MSA
124066370 5270 Rosid View MSA
123751196 5271 Pentapetalae View MSA
122788614 5272 Eudicot View MSA
122044188 5273 Angiosperm View MSA
121352324 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain