Protein Family : germin 3 124248046

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  55

55 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29706.t000012 (1 of 2) PTHR31238//PTHR31238:SF21 - FAMILY NOT NAMED // GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 R. communis v0.1 993   29706: 92232-93224
29739.t000207 (1 of 2) PTHR31238//PTHR31238:SF21 - FAMILY NOT NAMED // GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 R. communis v0.1 969   29739: 1263705-1264673
orange1.1g028365m.g (1 of 1) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 C. sinensis v1.1 1280   scaffold00032: 338400-339679
AT5G20630 (1 of 2) PTHR31238//PTHR31238:SF21 - FAMILY NOT NAMED // GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 A. thaliana TAIR10 GER3 890   Chr5: 6975104-6975993
AT1G72610 (1 of 2) PTHR31238//PTHR31238:SF21 - FAMILY NOT NAMED // GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 A. thaliana TAIR10 GER1 931   Chr1: 27339114-27340044
Thhalv10014670m.g (1 of 2) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 E. salsugineum v1.0 961   scaffold_2: 7103333-7104293
Thhalv10019138m.g (1 of 2) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 E. salsugineum v1.0 917   scaffold_9: 3444338-3445254
Ciclev10026481m.g (1 of 1) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 C. clementina v1.0 1003   scaffold_7: 7118759-7119761
Lus10010769.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 657   scaffold18: 27941-28597
Lus10037661.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 645   scaffold196: 953606-954250
Lus10037663.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 645   scaffold196: 958361-959005
Lus10037664.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 1374   scaffold196: 960359-961732
Lus10037665.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 657   scaffold196: 963233-963889
Lus10037666.g (1 of 49) PF00190 - Cupin (Cupin_1) L. usitatissimum v1.0 639   scaffold196: 966474-967112
Lus10020026.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 648   scaffold23: 474431-475078
Lus10036296.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 666   scaffold27: 1140734-1141399
Lus10002795.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 627   scaffold322: 58749-59375
Lus10015643.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 633   scaffold630: 227293-227925
Lus10015644.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 648   scaffold630: 229294-229941
Lus10015646.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 1363   scaffold630: 233081-234443
Lus10015647.g (1 of 49) PF00190 - Cupin (Cupin_1) L. usitatissimum v1.0 639   scaffold630: 239205-239843
Lus10020851.g (1 of 56) PF07883 - Cupin domain (Cupin_2) L. usitatissimum v1.0 660   scaffold711: 223432-224091
Lus10022020.g (1 of 13) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 L. usitatissimum v1.0 663   scaffold87: 347868-348530
Gorai.009G035800 (1 of 4) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 G. raimondii v2.1 1247   Chr09: 2652714-2653960
Gorai.009G035500 (1 of 4) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 G. raimondii v2.1 1278   Chr09: 2649107-2650384
Gorai.006G095100 (1 of 4) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 G. raimondii v2.1 1157   Chr06: 33380894-33382050
Thecc1EG029131 (1 of 2) PTHR31238//PTHR31238:SF21 - FAMILY NOT NAMED // GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 T. cacao v1.1 2081   scaffold_6: 20842639-20844719
Thecc1EG037546 (1 of 2) PTHR31238//PTHR31238:SF21 - FAMILY NOT NAMED // GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 T. cacao v1.1 3394   scaffold_9: 4052575-4055968
Araha.9920s0006 (1 of 1) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 A. halleri v1.1 606   Scaffold9920: 25369-25974
Cagra.1013s0040 (1 of 2) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 C. grandiflora v1.1 834   Scaffold1013: 138542-139375

55 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT5G20630.1 A. thaliana TAIR10 124248046 germin 3 2 5268 Malvidae
Ciclev10026481m C. clementina v1.0 124248046 germin 3 1 5268 Malvidae
Lus10010769 L. usitatissimum v1.0 124248046 germin 3 15 5268 Malvidae
Lus10037664 L. usitatissimum v1.0 124248046 germin 3 15 5268 Malvidae
Gorai.009G035800.1 G. raimondii v2.1 124248046 germin 3 3 5268 Malvidae
Thecc1EG029131t1 T. cacao v1.1 124248046 germin 3 2 5268 Malvidae
Brara.B00894.1.p B. rapa FPsc v1.3 124248046 germin 3 4 5268 Malvidae
SapurV1A.0622s0020.1.p S. purpurea v1.0 124248046 germin 3 3 5268 Malvidae
SapurV1A.0616s0140.1.p S. purpurea v1.0 124248046 germin 3 3 5268 Malvidae
Manes.03G039900.1.p M. esculenta v6.1 124248046 germin 3 4 5268 Malvidae
Potri.003G065300.1.p P. trichocarpa v3.1 124248046 germin 3 4 5268 Malvidae
Potri.006G142600.1.p P. trichocarpa v3.1 124248046 germin 3 4 5268 Malvidae
Podel.01G179900.1.p P. deltoides WV94 v2.1 124248046 germin 3 3 5268 Malvidae
Podel.06G156200.1.p P. deltoides WV94 v2.1 124248046 germin 3 3 5268 Malvidae
Carub.0002s1945.1.p C. rubella v1.1 124248046 germin 3 2 5268 Malvidae
29739.m003771 R. communis v0.1 124248046 germin 3 2 5268 Malvidae
29706.m001282 R. communis v0.1 124248046 germin 3 2 5268 Malvidae
orange1.1g028365m C. sinensis v1.1 124248046 germin 3 1 5268 Malvidae
AT1G72610.1 A. thaliana TAIR10 124248046 germin 3 2 5268 Malvidae
Thhalv10014670m E. salsugineum v1.0 124248046 germin 3 2 5268 Malvidae
Thhalv10019138m E. salsugineum v1.0 124248046 germin 3 2 5268 Malvidae
Lus10036296 L. usitatissimum v1.0 124248046 germin 3 15 5268 Malvidae
Lus10022020 L. usitatissimum v1.0 124248046 germin 3 15 5268 Malvidae
Lus10037661 L. usitatissimum v1.0 124248046 germin 3 15 5268 Malvidae
Lus10037665 L. usitatissimum v1.0 124248046 germin 3 15 5268 Malvidae
Lus10002795 L. usitatissimum v1.0 124248046 germin 3 15 5268 Malvidae
Lus10037663 L. usitatissimum v1.0 124248046 germin 3 15 5268 Malvidae
Lus10037666 L. usitatissimum v1.0 124248046 germin 3 15 5268 Malvidae
Lus10020026 L. usitatissimum v1.0 124248046 germin 3 15 5268 Malvidae
Lus10015647 L. usitatissimum v1.0 124248046 germin 3 15 5268 Malvidae